RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TMCC1O94876 653 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 MMP3P08254 477 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 POU2F2P09086 479 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 CAPN2P17655 700 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 RFC1P35251 1148 aaPredicted RBP0.75□□□□□ -2.29
LMBR1-222ENST00000638959 CYP2J2P51589 502 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 P3H1Q32P28 736 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 CCNYL2Q5T2Q4 361 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 KLHL24Q6TFL4 600 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 KRT27Q7Z3Y8 459 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 KRT26Q7Z3Y9 468 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 PATL1Q86TB9 770 aaKnown RBP0.75□□□□□ -2.29
LMBR1-222ENST00000638959 HPS6Q86YV9 775 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 STPG4Q8N801 248 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 TMEM18Q96B42 140 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 MVB12AQ96EY5 273 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 FAM227BQ96M60 508 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 NT5C1BQ96P26 610 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 PKP2Q99959 881 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 FRMD8Q9BZ67 464 aaPredicted RBP0.75□□□□□ -2.29
LMBR1-222ENST00000638959 GTPBP4Q9BZE4 634 aaKnown RBP0.75□□□□□ -2.29
LMBR1-222ENST00000638959 SLC13A1Q9BZW2 595 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 PUS7LQ9H0K6 701 aaKnown RBP0.75□□□□□ -2.29
LMBR1-222ENST00000638959 PRDM8Q9NQV8 689 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 SACM1LQ9NTJ5 587 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 TMEM51Q9NW97 253 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 HCFC1R1Q9NWW0 138 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 CDH22Q9UJ99 828 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 C2CD2Q9Y426 696 aa0.75□□□□□ -2.29
LMBR1-222ENST00000638959 TRIM43BA6NCK2 446 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 M0QZQ0 153 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 TXNP10599 105 aaKnown RBP0.74□□□□□ -2.29
LMBR1-222ENST00000638959 CNGA1P29973 690 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 SLC7A1P30825 629 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 BRWD1-AS2P59051 145 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 RELQ04864 619 aaPredicted RBP0.74□□□□□ -2.29
LMBR1-222ENST00000638959 GPS1Q13098 491 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 PMS2P11Q13670 270 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 PDSS1Q5T2R2 415 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 PAQR6Q6TCH4 344 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 ATF7IPQ6VMQ6 1270 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 KCTD8Q6ZWB6 473 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 AADATQ8N5Z0 425 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 DDHD1Q8NEL9 900 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 OR2T6Q8NHC8 308 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 GPT2Q8TD30 523 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 ABHD5Q8WTS1 349 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 ZNRF4Q8WWF5 429 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 TRIM43Q96BQ3 446 aaPredicted RBP0.74□□□□□ -2.29
LMBR1-222ENST00000638959 CTRCQ99895 268 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 PIGQQ9BRB3 760 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 ZMAT3Q9HA38 289 aaKnown RBP0.74□□□□□ -2.29
LMBR1-222ENST00000638959 TCF7L1Q9HCS4 588 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 KLHL1Q9NR64 748 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 SEL1LQ9UBV2 794 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 ITGB1BP2Q9UKP3 347 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 EXOGQ9Y2C4 368 aaKnown RBP0.74□□□□□ -2.29
LMBR1-222ENST00000638959 MOB4Q9Y3A3 225 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 PSAT1Q9Y617 370 aa0.74□□□□□ -2.29
LMBR1-222ENST00000638959 A0A088AWK7 358 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 A0A0G2JLW4 131 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 C17orf102A2RUQ5 167 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 TBX3O15119 743 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 MID1O15344 667 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 VNN2O95498 520 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 GYS1P13807 737 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 TYMPP19971 482 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 BTF3P20290 206 aaKnown RBP0.73□□□□□ -2.29
LMBR1-222ENST00000638959 LIMK2P53671 638 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 ADORA2A-AS1P86434 159 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 RHAGQ02094 409 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 COX10Q12887 443 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 PKP1Q13835 747 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 CCDC144BQ3MJ40 725 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 TAF1BQ53T94 588 aaPredicted RBP0.73□□□□□ -2.29
LMBR1-222ENST00000638959 SYDE2Q5VT97 1194 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 WDR93Q6P2C0 686 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 ZNF852Q6ZMS4 543 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 TRIM58Q8NG06 486 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 BBS10Q8TAM1 723 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 C8orf37Q96NL8 207 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 RAB11FIP5Q9BXF6 653 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 RTN4RQ9BZR6 473 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 NPFFR1Q9GZQ6 430 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 CSTL1Q9H114 145 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 FBXO28Q9NVF7 368 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 SLC5A4Q9NY91 659 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 TRHDEQ9UKU6 1024 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 MRPL42Q9Y6G3 142 aaKnown RBP0.73□□□□□ -2.29
LMBR1-222ENST00000638959 ABCA7Q8IZY2 2146 aa0.73□□□□□ -2.29
LMBR1-222ENST00000638959 PHLDB1Q86UU1 1377 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 TCRBV7S3A2A0A539 114 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 NPIPB5A8MRT5 1133 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 NPIPB4C9JG80 1138 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 GABRDO14764 452 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 PCDH17O14917 1159 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 CIDEAO60543 219 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 CTNND1O60716 968 aaKnown RBP0.72□□□□□ -2.29
LMBR1-222ENST00000638959 CAVIN2O95810 425 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 ALDOAP04075 364 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms