RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZHX1-C8orf76Q96EF9 292 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 C5orf34Q96MH7 638 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 IRX2Q9BZI1 471 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 DAPK2Q9UIK4 370 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CROTQ9UKG9 612 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 A0A1W2PQJ5 194 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 LOC110117498-PIK3R3F6TDL0 507 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 LARGE1O95461 756 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 DPEP1P16444 411 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 HOXB8P17481 243 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CDH5P33151 784 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 DNASE1L1P49184 302 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PSEN1P49768 467 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 NEK3P51956 506 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 MTM1Q13496 603 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PPP1R15BQ5SWA1 713 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 OTUD3Q5T2D3 398 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ZCCHC12Q6PEW1 402 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 FBXO36Q8NEA4 188 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ADCY4Q8NFM4 1077 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SELENOMQ8WWX9 145 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PIK3R3Q92569 461 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 EDEM1Q92611 657 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TAAR1Q96RJ0 339 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PDGFDQ9GZP0 370 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ZDHHC4Q9NPG8 344 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 EXD2Q9NVH0 621 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CRNNQ9UBG3 495 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SAMD4AQ9UPU9 718 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SHOC2Q9UQ13 582 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 RWDD3Q9Y3V2 267 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CAMSAP1Q5T5Y3 1602 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 WASHC1A8K0Z3 465 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 WASH3PC4AMC7 463 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 BTN3A3O00478 584 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 VIL1P09327 827 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MNDAP41218 407 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 BTN3A2P78410 334 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SPIRE1Q08AE8 756 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MGAT5Q09328 741 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 HECTD3Q5T447 861 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 WASH2PQ6VEQ5 465 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ATG14Q6ZNE5 492 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FAM131BQ86XD5 332 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PHF10Q8WUB8 498 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 HEXDCQ8WVB3 486 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RAD51AP1Q96B01 352 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 APOL2Q9BQE5 337 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SEMA3GQ9NS98 782 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 GMIPQ9P107 970 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 BTBD7Q9P203 1132 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RABGEF1Q9UJ41 708 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PHGDHO43175 533 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SEMA3DO95025 777 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CLPTM1O96005 669 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PLEKP08567 350 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FXR2P51116 673 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ORC1Q13415 861 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TOP3AQ13472 1001 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 GRM3Q14832 879 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FIP1L1Q6UN15 594 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FBXO33Q7Z6M2 555 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 COL23A1Q86Y22 540 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CCDC36Q8IYA8 594 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CCDC33Q8N5R6 958 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 UBR7Q8N806 425 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ATP8B4Q8TF62 1192 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FNDC11Q9BVV2 318 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ABHD16BQ9H3Z7 469 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TOR4AQ9NXH8 423 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CDH9Q9ULB4 789 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PHTF1Q9UMS5 762 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MAP3K4Q9Y6R4 1608 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 QRICH2Q9H0J4 1663 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CCT8L1PA6NM43 557 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 HACD1B0YJ81 288 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FGF10O15520 208 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PLIN3O60664 434 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 OR5F1O95221 314 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PSEN2P49810 448 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CAV3P56539 151 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 DNAJC3Q13217 504 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FAM91A1Q658Y4 838 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RNF43Q68DV7 783 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 DHFR2Q86XF0 187 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 IFNL1Q8IU54 200 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 DEPDC4Q8N2C3 294 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TTC29Q8NA56 475 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TNKS2Q9H2K2 1166 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SETD4Q9NVD3 440 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 DLGAP2Q9P1A6 1054 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TAGLN3Q9UI15 199 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF222Q9UK12 451 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 DNAJC16Q9Y2G8 782 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RHPN2P1A8MT19 583 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CAPN14A8MX76 684 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CLDN4O14493 209 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 NQO1P15559 274 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SP100P23497 879 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ACAT1P24752 427 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms