RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ADARP55265 1226 aaKnown RBP13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 CDH4P55283 916 aa13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 SLC34A1Q06495 639 aa13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 FAAH2Q6GMR7 532 aa13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 DPF2Q92785 391 aa13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 DCLK3Q9C098 648 aa13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 TUBA8Q9NY65 449 aaPredicted RBP13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 KCNK4Q9NYG8 393 aa13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 AREL1O15033 823 aa13.33□□□□□ -0.27
SYNGAP1-208ENST00000629380 SMCO3A2RU48 225 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 MLYCDO95822 493 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 ACOT1Q86TX2 421 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 SLC4A11Q8NBS3 891 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 MTG1Q9BT17 334 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CHID1Q9BWS9 393 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CHKBQ9Y259 395 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 COL5A2P05997 1499 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CSH1P0DML2 217 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CSH2P0DML3 217 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CCZ1BP86790 482 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CCZ1P86791 482 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 C5orf22Q49AR2 442 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 HPS6Q86YV9 775 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 FAM136AQ96C01 138 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 VAT1Q99536 393 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 IL22Q9GZX6 179 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 IKZF3Q9UKT9 509 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 RAB23Q9ULC3 237 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 ACO1P21399 889 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 OLR1P78380 273 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 RIPK1Q13546 671 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 NR1D2Q14995 579 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 MAGEE2Q8TD90 523 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CAVIN3Q969G5 261 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMBIM4Q9HC24 238 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 TNFSF13BQ9Y275 285 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 MBTD1Q05BQ5 628 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 RBM7Q9Y580 266 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CEMIPQ8WUJ3 1361 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 ALOX5P09917 674 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CRATP43155 626 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 LSM12Q3MHD2 195 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 MOXD1Q6UVY6 613 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 PIH1D2Q8WWB5 315 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 GPN3Q9UHW5 284 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMA7Q9Y2S6 64 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 QSOX1O00391 747 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 MMP13P45452 471 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 TTPAP49638 278 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 PPATQ06203 517 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 MIIPQ5JXC2 388 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 SPATA9Q9BWV2 254 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 ELOVL4Q9GZR5 314 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 SOHLH2Q9NX45 425 aa13.33□□□□□ -0.28
SYNGAP1-208ENST00000629380 CHST10O43529 356 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 RFTN2Q52LD8 501 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 ANKRD7Q92527 254 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZNF354BQ96LW1 612 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SLC12A8A0AV02 714 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 LTFP02788 710 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 WEE1P30291 646 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SWI5Q1ZZU3 235 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SMU1Q2TAY7 513 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 LPCAT1Q8NF37 534 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 DCUN1D5Q9BTE7 237 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SENP6Q9GZR1 1112 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 MFSD1Q9H3U5 465 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 POLD4Q9HCU8 107 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 PFDN2Q9UHV9 154 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 IQCMA0A1B0GVH7 501 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SYT12Q8IV01 421 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 MSRAQ9UJ68 235 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SAMD4AQ9UPU9 718 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 TGFB3P10600 412 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 CTSEP14091 401 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 HKDC1Q2TB90 917 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 KLHL23Q8NBE8 558 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 VCPIP1Q96JH7 1222 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 POMKQ9H5K3 350 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 GJB4Q9NTQ9 266 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 WBP11Q9Y2W2 641 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 PCDHGA3Q9Y5H0 932 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SCN8AQ9UQD0 1980 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 MROH2AA6NES4 1674 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 TRDMT1O14717 391 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 SIN3BO75182 1162 aa13.32□□□□□ -0.28
SYNGAP1-208ENST00000629380 MTM1Q13496 603 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms