RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 COX4I1P13073 169 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 NCF2P19878 526 aaPredicted RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 GRK2P25098 689 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 EPHA3P29320 983 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 LRPAP1P30533 357 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 MSX2P35548 267 aaPredicted RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 AVPR1AP37288 418 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 GARSP41250 739 aaKnown RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 GLRBP48167 497 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SERPINB8P50452 374 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 THOP1P52888 689 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 MTTPP55157 894 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SH3BP2P78314 561 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 MPP1Q00013 466 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 BEX3Q00994 111 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 DSG1Q02413 1049 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 GALNT2Q10471 571 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 TBL3Q12788 808 aaKnown RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 IFRD2Q12894 506 aaPredicted RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SNAPC2Q13487 334 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 CUL3Q13618 768 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 IHHQ14623 411 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 EML3Q32P44 896 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 NOMO2Q5JPE7 1267 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 GRTP1Q5TC63 336 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 DENND5AQ6IQ26 1287 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ISLR2Q6UXK2 745 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SPATA31D4Q6ZUB0 917 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ADGRG6Q86SQ4 1221 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 KBTBD6Q86V97 674 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 KCNMB4Q86W47 210 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ZC3HC1Q86WB0 502 aaKnown RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 DENND6AQ8IWF6 608 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ARHGAP12Q8IWW6 846 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 KLHDC8BQ8IXV7 354 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ARHGAP24Q8N264 748 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 BEND7Q8N7W2 519 aaPredicted RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 FAM174AQ8TBP5 190 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 URGCPQ8TCY9 931 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SH3RF2Q8TEC5 729 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 KCTD4Q8WVF5 259 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 CDKL2Q92772 493 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 LPPQ93052 612 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 NTAN1Q96AB6 310 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 PTPN18Q99952 460 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SIKE1Q9BRV8 207 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 TINF2Q9BSI4 451 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 KLF16Q9BXK1 252 aaPredicted RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 FTHL17Q9BXU8 183 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 OSBPL2Q9H1P3 480 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 LRRC40Q9H9A6 602 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 IARS2Q9NSE4 1012 aaKnown RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 NDFIP2Q9NV92 336 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 OXSMQ9NWU1 459 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ZDHHC7Q9NXF8 308 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SLC2A6Q9UGQ3 507 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ZDHHC2Q9UIJ5 367 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 FBXW11Q9UKB1 542 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ADAM28Q9UKQ2 775 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ANGPTL2Q9UKU9 493 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SORCS3Q9UPU3 1222 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 UNCXA6NJT0 531 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 C9IYK1 514 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 F8W810 466 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 HAS3O00219 553 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 MATN2O00339 956 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 NEMP1O14524 444 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 PPP1R12AO14974 1030 aaPredicted RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 CACNG3O60359 315 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 HUS1O60921 280 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 CIB2O75838 187 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 KLHL2O95198 593 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 HSPA4LO95757 839 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 MT-CYBP00156 380 aaPredicted RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 AHSGP02765 367 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 SMIM18P0DKX4 95 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 PIM1P11309 404 aaPredicted RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 RAG1P15918 1043 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 YBX3P16989 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 XRCC1P18887 633 aaPredicted RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 PIK3R1P27986 724 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 SERPINB5P36952 375 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 CHRNA4P43681 627 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 ARCN1P48444 511 aaKnown RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 GJA9P57773 515 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 TPI1P60174 286 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 AP2B1P63010 937 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 SARNPP82979 210 aaKnown RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 MS4A2Q01362 244 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 MPP3Q13368 585 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 EIF4EBP2Q13542 120 aaPredicted RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 CEACAM7Q14002 265 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 FRG1Q14331 258 aaKnown RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 GK3PQ14409 553 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 CCL14Q16627 93 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 LSM12Q3MHD2 195 aaKnown RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 SV2CQ496J9 727 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 ZNF789Q5FWF6 425 aa4.38□□□□□ -1.71
SEC22B-202ENST00000618538 ARL13AQ5H913 290 aaPredicted RBP4.38□□□□□ -1.71
SEC22B-202ENST00000618538 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms