RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CTNNB1P35222 781 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 UGT1A5P35504 534 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 IGFALSP35858 605 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 FAAH2Q6GMR7 532 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 DNAJC14Q6Y2X3 702 aaPredicted RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 CDH24Q86UP0 819 aa11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 MRPS23Q9Y3D9 190 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-208ENST00000618081 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 C1orf232A0A0U1RR37 186 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 PTGES3LE9PB15 166 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 RECQL4O94761 1208 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ACAT1P24752 427 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ELK3P41970 407 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 SMIM5Q71RC9 77 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 PALB2Q86YC2 1186 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 MLPHQ9BV36 600 aaPredicted RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 DSN1Q9H410 356 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 MAGEB3O15480 346 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 AP3S1Q92572 193 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 SLC25A23Q9BV35 468 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 BTBD7Q9P203 1132 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 RPTORQ8N122 1335 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 A8MX80 341 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 NPR3P17342 541 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 BMP7P18075 431 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 NOS2P35228 1153 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 CORO7P57737 925 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 GCNT1Q02742 428 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 C1orf50Q9BV19 199 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ZSCAN5CA6NGD5 496 aaPredicted RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 AKAP3O75969 853 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ADH1AP07327 375 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 TPH1P17752 444 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ALOX12P18054 663 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 RPL4P36578 427 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 NKAPQ8N5F7 415 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 DLG3Q92796 817 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 BTBD3Q9Y2F9 522 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 PHF10Q8WUB8 498 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 RBM7Q9Y580 266 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 SULT2A1Q06520 285 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 TBC1D25Q3MII6 688 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 GPC2Q8N158 579 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ZCCHC7Q8N3Z6 543 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF276Q8N554 614 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 TRAPPC9Q96Q05 1148 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ADAM2Q99965 735 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 PDCD10Q9BUL8 212 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 CEP41Q9BYV8 373 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 UNKQ9C0B0 810 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 NUAK2Q9H093 628 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ASB8Q9H765 288 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 NEUROD4Q9HD90 331 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 PRDM8Q9NQV8 689 aa11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 DMGDHQ9UI17 866 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-208ENST00000618081 ME2P23368 584 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 NEDD8Q15843 81 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF607Q96SK3 696 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 DAPK2Q9UIK4 370 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 TFR2Q9UP52 801 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ARHGEF28Q8N1W1 1705 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 PPM1AP35813 382 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CD86P42081 329 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 POLD2P49005 469 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 AFTPHQ6ULP2 937 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 PROSER1Q86XN7 944 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 OXNAD1Q96HP4 312 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CORO1BQ9BR76 489 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CHADO15335 359 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CLOCKO15516 846 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 KCNT2Q6UVM3 1135 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ADGRG2Q8IZP9 1017 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 GDPD5Q8WTR4 605 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 NELL1Q92832 810 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CRELD1Q96HD1 420 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 HTATIP2Q9BUP3 242 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ABCG4Q9H172 646 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 MFHAS1Q9Y4C4 1052 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CDC42P60953 191 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 PPATQ06203 517 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 KAT5Q92993 513 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 EIF4BP23588 611 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 PRKAG1P54619 331 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms