RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 C11orf63Q6NUN7 778 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ATXN2LQ8WWM7 1075 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CDCA5Q96FF9 252 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SLC38A2Q96QD8 506 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SEPT5Q99719 369 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 HGH1Q9BTY7 390 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 BIN3Q9NQY0 253 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 HOXC10Q9NYD6 342 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 FAM208AQ9UK61 1670 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CLDN25C9JDP6 229 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CASRP41180 1078 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CDC42P60953 191 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 HTRA4P83105 476 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 E2F2Q14209 437 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 AKR1C8PQ5T2L2 129 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 TRNT1Q96Q11 434 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SLC22A4Q9H015 551 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 TOPORSQ9NS56 1045 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 FLT1P17948 1338 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 MID1O15344 667 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 WEE2P0C1S8 567 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PDGFRAP16234 1089 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PTK6Q13882 451 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PIGHQ14442 188 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ELMO1Q92556 727 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 WWOXQ9NZC7 414 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ATP6V1G2-DDX39BF2Z307 99 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 H3BN98 237 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SNAP29O95721 258 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PEPDP12955 493 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ERCC2P18074 760 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CDC25AP30304 524 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 NAB1Q13506 487 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 USP10Q14694 798 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 TXN2Q99757 166 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PABPC3Q9H361 631 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ARHGEF4Q9NR80 690 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 NCK2O43639 380 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 DNAJC14Q6Y2X3 702 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SNX20Q7Z614 316 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 OR2B2Q9GZK3 357 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 BHLHE40O14503 412 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CPNE3O75131 537 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ME2P23368 584 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CDKN2CP42773 168 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 USP46P62068 366 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ATP6AP1LQ52LC2 224 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF667Q5HYK9 610 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CYP2U1Q7Z449 544 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 POF1BQ8WVV4 589 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 AUTS2Q8WXX7 1259 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 DPF2Q92785 391 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 COG8Q96MW5 612 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 UFSP2Q9NUQ7 469 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ST3GAL5Q9UNP4 418 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SOAT2O75908 522 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 DNTTP04053 509 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 GRB14Q14449 540 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CDO1Q16878 200 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SLC25A25Q6KCM7 469 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 HELQQ8TDG4 1101 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF219Q9P2Y4 722 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 RECQL5O94762 991 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PLATP00750 562 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PGRP06401 933 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ETS2P15036 469 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 VPS72Q15906 364 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 AGKQ53H12 422 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PAGE2Q7Z2X7 111 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ARPINQ7Z6K5 226 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 HEMGNQ9BXL5 484 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 CRISPLD1Q9H336 500 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ANAPC2Q9UJX6 822 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 NEU2Q9Y3R4 380 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PLD2O14939 933 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 C9P02748 559 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 HMGCRP04035 888 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 SCGB2A2Q13296 93 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PON2Q15165 354 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 MEA1Q16626 185 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 C3orf33Q6P1S2 294 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 TMED9Q9BVK6 235 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 MAN1C1Q9NR34 630 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PTGFRNQ9P2B2 879 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PCDHGA4Q9Y5G9 962 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF335Q9H4Z2 1342 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 NID2Q14112 1375 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 RPL6Q02878 288 aaKnown RBP9.37□□□□□ -0.91
COL12A1-211ENST00000615798 PGS1Q32NB8 556 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 KIAA1841Q6NSI8 718 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 LEMD2Q8NC56 503 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 STARD8Q92502 1023 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF649Q9BS31 505 aa9.37□□□□□ -0.91
COL12A1-211ENST00000615798 RPL4P36578 427 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GNA12Q03113 381 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 TWF1Q12792 350 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FAM91A1Q658Y4 838 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms