RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ABI3BPQ7Z7G0 1075 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 XYLT1Q86Y38 959 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 DRC7Q8IY82 874 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 SLC22A18ASQ8N1D0 253 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 RYBPQ8N488 228 aaPredicted RBP18.21■□□□□ 0.51
SMN2-213ENST00000614240 PCDH20Q8N6Y1 951 aaKnown RBP18.21■□□□□ 0.51
SMN2-213ENST00000614240 HAPLN3Q96S86 360 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 ZYG11BQ9C0D3 744 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 NDST4Q9H3R1 872 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 ZDHHC6Q9H6R6 413 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 FCF1Q9Y324 198 aaKnown RBP18.21■□□□□ 0.51
SMN2-213ENST00000614240 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
SMN2-213ENST00000614240 ARID1BQ8NFD5 2236 aaPredicted RBP18.21■□□□□ 0.5
SMN2-213ENST00000614240 H3BM21 787 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 NEMP1O14524 444 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 MPOP05164 745 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 L1CAMP32004 1257 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 CDH5P33151 784 aaPredicted RBP18.2■□□□□ 0.5
SMN2-213ENST00000614240 FLT3P36888 993 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 CCNHP51946 323 aaPredicted RBP18.2■□□□□ 0.5
SMN2-213ENST00000614240 CXADRP78310 365 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 VWA3BQ502W6 1294 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 C2CD6Q53TS8 623 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 FAM131BQ86XD5 332 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 SPACA3Q8IXA5 215 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 LSMEM2Q8N112 164 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 MAPK15Q8TD08 544 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 NAF1Q96HR8 494 aaKnown RBP18.2■□□□□ 0.5
SMN2-213ENST00000614240 CFAP57Q96MR6 1250 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 CAAP1Q9H8G2 361 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 USP29Q9HBJ7 922 aa18.2■□□□□ 0.5
SMN2-213ENST00000614240 POM121BA6NF01 834 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 K7ESM1 405 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 FPGTO14772 594 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 USP12O75317 370 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 CSO75390 466 aaKnown RBP18.19■□□□□ 0.5
SMN2-213ENST00000614240 ZMPSTE24O75844 475 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 NEBLO76041 1014 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 GP1BAP07359 652 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 GIMD1P0DJR0 217 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 PCBP4P57723 403 aaKnown RBP18.19■□□□□ 0.5
SMN2-213ENST00000614240 GABREP78334 506 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 ATP11AP98196 1134 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 TLE3Q04726 772 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 FZD2Q14332 565 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 HSP90AA4PQ58FG1 418 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 BROXQ5VW32 411 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 CDCP2Q5VXM1 449 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 KYAT3Q6YP21 454 aaKnown RBP18.19■□□□□ 0.5
SMN2-213ENST00000614240 ZNF248Q8NDW4 579 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 BMFQ96LC9 184 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 ZNF578Q96N58 590 aaPredicted RBP18.19■□□□□ 0.5
SMN2-213ENST00000614240 TUBGCP2Q9BSJ2 902 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 TM6SF2Q9BZW4 377 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 FADS3Q9Y5Q0 445 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 FHOD1Q9Y613 1164 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 DOCK9Q9BZ29 2069 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 MYLKQ15746 1914 aa18.19■□□□□ 0.5
SMN2-213ENST00000614240 TEX51A0A1B0GUA7 166 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 CPED1A4D0V7 1026 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 ZNF821O75541 412 aaPredicted RBP18.18■□□□□ 0.5
SMN2-213ENST00000614240 LSM8O95777 96 aaKnown RBP18.18■□□□□ 0.5
SMN2-213ENST00000614240 ETFBP38117 255 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 RABIFP47224 123 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 UBE2HP62256 183 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 PDE1CQ14123 709 aaPredicted RBP18.18■□□□□ 0.5
SMN2-213ENST00000614240 FGL2Q14314 439 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 ARL13BQ3SXY8 428 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 RWDD4Q6NW29 188 aaKnown RBP18.18■□□□□ 0.5
SMN2-213ENST00000614240 PARS2Q7L3T8 475 aaKnown RBP18.18■□□□□ 0.5
SMN2-213ENST00000614240 PARGQ86W56 976 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 FAM181AQ8N9Y4 354 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 ZNF548Q8NEK5 533 aaPredicted RBP18.18■□□□□ 0.5
SMN2-213ENST00000614240 IFI44Q8TCB0 444 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 CPA5Q8WXQ8 436 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 NCKIPSDQ9NZQ3 722 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 HPCAL4Q9UM19 191 aa18.18■□□□□ 0.5
SMN2-213ENST00000614240 SPTY2D1-AS1A0A0U1RR47 76 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 IGLON5A6NGN9 336 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 RAD51BO15315 384 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 TSPAN6O43657 245 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 AP1G1O43747 822 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 CSF2P04141 144 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 NME1P15531 152 aaKnown RBP18.17■□□□□ 0.5
SMN2-213ENST00000614240 ARF5P84085 180 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 POLD3Q15054 466 aaPredicted RBP18.17■□□□□ 0.5
SMN2-213ENST00000614240 CDKN3Q16667 212 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 KLHDC7AQ5VTJ3 777 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 NAA35Q5VZE5 725 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 TRNP1Q6NT89 227 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 ZCCHC8Q6NZY4 707 aaKnown RBP18.17■□□□□ 0.5
SMN2-213ENST00000614240 NOP9Q86U38 636 aaKnown RBP18.17■□□□□ 0.5
SMN2-213ENST00000614240 ZSCAN30Q86W11 494 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 LSM14AQ8ND56 463 aaKnown RBP18.17■□□□□ 0.5
SMN2-213ENST00000614240 OR6K2Q8NGY2 324 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 POLR1BQ9H9Y6 1135 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 PPARGC1AQ9UBK2 798 aaKnown RBP18.17■□□□□ 0.5
SMN2-213ENST00000614240 ZNF212Q9UDV6 495 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 OR12D3Q9UGF7 316 aa18.17■□□□□ 0.5
SMN2-213ENST00000614240 TMEM59LQ9UK28 342 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms