RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ZNF624Q9P2J8 865 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 SLC9A2Q9UBY0 812 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 TFR2Q9UP52 801 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 PCDHB2Q9Y5E7 798 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 ZC3H4Q9UPT8 1303 aaKnown RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 CYP3A7-CYP3A51PA0A087WV96 503 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 TSTD3H0UI37 97 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 TNNI3P19429 210 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 CYP3A7P24462 503 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 MAPK9P45984 424 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 ADAM15Q13444 863 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 NOMO2Q5JPE7 1267 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 OGFOD2Q6N063 350 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 CREB3L2Q70SY1 520 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 DEPDC4Q8N2C3 294 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 SMG8Q8ND04 991 aaKnown RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 KLHL6Q8WZ60 621 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 GPN1Q9HCN4 374 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 INTS13Q9NVM9 706 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 PLOD2O00469 737 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 DCXO43602 365 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MSR1P21757 451 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CAPZA2P47755 286 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 AP3M2P53677 418 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PTPAQ15257 358 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 RBM48Q5RL73 367 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 GJA10Q969M2 543 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CCDC115Q96NT0 180 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NODALQ96S42 347 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 RUVBL1Q9Y265 456 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 ANKRD6Q9Y2G4 727 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OR6C70A6NIJ9 312 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ITGA10O75578 1167 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 RECQL5O94762 991 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 IL13P35225 146 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MAPK10P53779 464 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 RPS7P62081 194 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 PIGHQ14442 188 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 KBTBD6Q86V97 674 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CBR4Q8N4T8 237 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ADI1Q9BV57 179 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ACTR3BQ9P1U1 418 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SSR3Q9UNL2 185 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PDXKO00764 312 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PMPCBO75439 489 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NCAM1P13591 858 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PKNOX1P55347 436 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 LRRC24Q50LG9 513 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CNTD1Q8N815 330 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 LSMEM1Q8N8F7 131 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SLC16A10Q8TF71 515 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SGK3Q96BR1 496 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MTMR8Q96EF0 704 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ASNSD1Q9NWL6 643 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 FIS1Q9Y3D6 152 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 EFCAB9A8MZ26 197 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 POLR1CO15160 346 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 CD40LGP29965 261 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF772Q68DY9 489 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 DPH6Q7L8W6 267 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NOXA1Q86UR1 476 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 EXD1Q8NHP7 514 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 HEXDCQ8WVB3 486 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MAFIPQ8WZ33 124 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NACC1Q96RE7 527 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 RBM4BQ9BQ04 359 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 RBM4Q9BWF3 364 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 SPATA31D1Q6ZQQ2 1576 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ACOX3O15254 700 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 C6orf222P0C671 652 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 STT3AP46977 705 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 RORCP51449 518 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 VEPH1Q14D04 833 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 AMIGO1Q86WK6 493 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ZSCAN29Q8IWY8 852 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 WDSUB1Q8N9V3 476 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TMEM35BQ8NCS4 154 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MRPL48Q96GC5 212 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 HES6Q96HZ4 224 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 DCAF16Q9NXF7 216 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TNFRSF10DQ9UBN6 386 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CIAO1O76071 339 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SOX30O94993 753 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 IFNA10P01566 189 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 IFNA4P05014 189 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NEK3P51956 506 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 STARD3Q14849 445 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 UBE2UQ5VVX9 321 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 EMC1Q8N766 993 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CDYL2Q8N8U2 506 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OR5H6Q8NGV6 325 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ADAMTS16Q8TE57 1224 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 RNF34Q969K3 372 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OLA1Q9NTK5 396 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 RIC8BQ9NVN3 520 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ADPRHL2Q9NX46 363 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 AP4E1Q9UPM8 1137 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OR6C65A6NJZ3 312 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NMT2O60551 498 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 HARS2P49590 506 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms