RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 APOBEC3BQ9UH17 382 aaKnown RBP17.57■□□□□ 0.4
CSNK1E-215ENST00000612795 TBC1D30Q9Y2I9 924 aa17.57■□□□□ 0.4
CSNK1E-215ENST00000612795 HS3ST4Q9Y661 456 aa17.57■□□□□ 0.4
CSNK1E-215ENST00000612795 AHCTF1Q8WYP5 2266 aa17.57■□□□□ 0.4
CSNK1E-215ENST00000612795 BSNQ9UPA5 3926 aa17.57■□□□□ 0.4
CSNK1E-215ENST00000612795 FAM237AA0A1B0GTK4 181 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 RNF103O00237 685 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 MED7O43513 233 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 SMAD6O43541 496 aaKnown RBP17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 LEFTY1O75610 366 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 ITGB2P05107 769 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 SLC5A2P31639 672 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 NME3Q13232 169 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 SGCGQ13326 291 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 TAF5Q15542 800 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 ANKRD40Q6AI12 368 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 LINGO4Q6UY18 593 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 ZNF574Q6ZN55 896 aaPredicted RBP17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 C14orf80Q86SX3 495 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 ARHGEF19Q8IW93 802 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 SLC35F3Q8IY50 421 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 DEFB106AQ8N104 65 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 DCAF4L2Q8NA75 395 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 LIN37Q96GY3 246 aaPredicted RBP17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 PSMB7Q99436 277 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 SIK2Q9H0K1 926 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 RMND1Q9NWS8 449 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 CHD5Q8TDI0 1954 aa17.56■□□□□ 0.4
CSNK1E-215ENST00000612795 TRIM49BA6NDI0 452 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 CASC3O15234 703 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 EFSO43281 561 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 PAGE1O75459 146 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 ENDOD1O94919 500 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 LETM1O95202 739 aaPredicted RBP17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 ANXA6P08133 673 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 SFTPCP11686 197 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 ITGB7P26010 798 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 THOP1P52888 689 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 PMS1P54277 932 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 KRT85P78386 507 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 GCNT1Q02742 428 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 LRRC63Q05C16 580 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 EIF3IQ13347 325 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 PDCLQ13371 301 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 C1orf61Q13536 156 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 MEA1Q16626 185 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 CCDC40Q4G0X9 1142 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 PRRT3Q5FWE3 981 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 TPRG1LQ5T0D9 272 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 ESRP1Q6NXG1 681 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 DPY19L3Q6ZPD9 716 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 TMEM110Q86TL2 294 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 ZSCAN30Q86W11 494 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 FBXO39Q8N4B4 442 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 STRADBQ9C0K7 418 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 PCDHGA7Q9Y5G6 932 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 FADS3Q9Y5Q0 445 aa17.55■□□□□ 0.4
CSNK1E-215ENST00000612795 TLN1Q9Y490 2541 aaKnown RBP17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 SPINT1O43278 529 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 THAP12O43422 761 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 SUV39H1O43463 412 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 HSF2BPO75031 334 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 GRAP2O75791 330 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 CNTN5O94779 1100 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 ADCY5O95622 1261 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 FAM87AP0C7U9 286 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 INHBCP55103 352 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 ADKP55263 362 aaKnown RBP17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 EIF2B5Q13144 721 aaKnown RBP17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 PTK2BQ14289 1009 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 TGIF1Q15583 401 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 RAB11FIP2Q7L804 512 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 PHACTR4Q8IZ21 702 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 SLC2A13Q96QE2 648 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 LRRC61Q9BV99 259 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 SLC13A1Q9BZW2 595 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 TCEAL2Q9H3H9 227 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 PADI4Q9UM07 663 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 WASF2Q9Y6W5 498 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 LRP4O75096 1905 aa17.54■□□□□ 0.4
CSNK1E-215ENST00000612795 UNC13CQ8NB66 2214 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 LMO7DNF2Z398 122 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 NEMP1O14524 444 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 PMM2O15305 246 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 AP1G1O43747 822 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 GCATO75600 419 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 ZNF202O95125 648 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 NTRK1P04629 796 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 GLI1P08151 1106 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 JMJD7P0C870 316 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 LIPCP11150 499 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 GNA15P30679 374 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 L1CAMP32004 1257 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 UGT1A5P35504 534 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 SRSF6Q13247 344 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 PNOCQ13519 176 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 ALFQ53S48 1182 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 EFHC1Q5JVL4 640 aa17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 ZNF658Q5TYW1 1059 aaPredicted RBP17.53■□□□□ 0.4
CSNK1E-215ENST00000612795 PARS2Q7L3T8 475 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms