RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 GPR152Q8TDT2 470 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 CCDC124Q96CT7 223 aaKnown RBP16.23■□□□□ 0.19
RTN1-209ENST00000611068 DCUN1D1Q96GG9 259 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 HIPK3Q9H422 1215 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 MANSC1Q9H8J5 431 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SAGE1Q9NXZ1 904 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SLC17A7Q9P2U7 560 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 DKK3Q9UBP4 350 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 PCDHB7Q9Y5E2 793 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 YJEFN3A6XGL0 299 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SERPINB6P35237 376 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 OTUD4Q01804 1114 aaKnown RBP16.23■□□□□ 0.19
RTN1-209ENST00000611068 KCNJ8Q15842 424 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 RABGAP1LQ5R372 815 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 AHI1Q8N157 1196 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 ACTL9Q8TC94 416 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 PLEKHA8Q96JA3 519 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SPATA17Q96L03 361 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 ZNF512Q96ME7 567 aaPredicted RBP16.23■□□□□ 0.19
RTN1-209ENST00000611068 SACM1LQ9NTJ5 587 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 DDX56Q9NY93 547 aaKnown RBP16.23■□□□□ 0.19
RTN1-209ENST00000611068 TTLL3Q9Y4R7 772 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 TTC3P53804 2025 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SCN5AQ14524 2016 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 TRIM64CA6NLI5 447 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 SOBPA7XYQ1 873 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 PIAS1O75925 651 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 CYP2F1P24903 491 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 CYP2A13Q16696 494 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 PHKG1Q16816 387 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 LRRC38Q5VT99 294 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 RAB3IL1Q8TBN0 382 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 RANBP9Q96S59 729 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 SH3GL1Q99961 368 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 SNRNP25Q9BV90 132 aaKnown RBP16.22■□□□□ 0.19
RTN1-209ENST00000611068 EHD1Q9H4M9 534 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 DHX35Q9H5Z1 703 aaKnown RBP16.22■□□□□ 0.19
RTN1-209ENST00000611068 NUDT5Q9UKK9 219 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 CDH23Q9H251 3354 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 ANKRD34BA5PLL1 514 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 GOLGA8RI6L899 631 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 SGK1O00141 431 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 LIASO43766 372 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 TADA2AO75478 443 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 SULT1E1P49888 294 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 EPHB1P54762 984 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 GDF10P55107 478 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 RPL26P61254 145 aaKnown RBP16.22■□□□□ 0.19
RTN1-209ENST00000611068 SLC25A3Q00325 362 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 BFSP2Q13515 415 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 HSF5Q4G112 596 aaPredicted RBP16.22■□□□□ 0.19
RTN1-209ENST00000611068 KYAT3Q6YP21 454 aaKnown RBP16.22■□□□□ 0.19
RTN1-209ENST00000611068 TMEM86AQ8N2M4 240 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 ALLCQ8N6M5 410 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 EFCAB3Q8N7B9 438 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 GRIN3AQ8TCU5 1115 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 DDI1Q8WTU0 396 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 KLF6Q99612 283 aaPredicted RBP16.22■□□□□ 0.19
RTN1-209ENST00000611068 PPARGC1AQ9UBK2 798 aaKnown RBP16.22■□□□□ 0.19
RTN1-209ENST00000611068 LRFN2Q9ULH4 789 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 MFHAS1Q9Y4C4 1052 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 AP4B1Q9Y6B7 739 aa16.22■□□□□ 0.19
RTN1-209ENST00000611068 A6NL46 340 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 A8MU76 341 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 AQP9O43315 295 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 SOAT2O75908 522 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 PRMT2P55345 433 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 RPS3AP61247 264 aaKnown RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 YWHAHQ04917 246 aaPredicted RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 CCNG2Q16589 344 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 RALGPS1Q5JS13 557 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 PPP2R2DQ66LE6 453 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 NIPAL1Q6NVV3 410 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 TMEM173Q86WV6 379 aaPredicted RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 C12orf50Q8NA57 414 aaPredicted RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 URGCPQ8TCY9 931 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 ABI2Q9NYB9 513 aaPredicted RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 CDH9Q9ULB4 789 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 ZNF12P17014 697 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 GSSP48637 474 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 GPR15P49685 360 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 MRPS5P82675 430 aaKnown RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 FAAP100Q0VG06 881 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 SEPT6Q14141 434 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 E2F2Q14209 437 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 SLC39A12Q504Y0 691 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 C6orf52Q5T4I8 152 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 EGFLAMQ63HQ2 1017 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.21■□□□□ 0.19
RTN1-209ENST00000611068 BPHLQ86WA6 291 aaPredicted RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 SCN4BQ8IWT1 228 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 COLGALT2Q8IYK4 626 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 FAM124BQ9H5Z6 455 aaPredicted RBP16.21■□□□□ 0.19
RTN1-209ENST00000611068 GIN1Q9NXP7 522 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.21■□□□□ 0.19
RTN1-209ENST00000611068 EBF1Q9UH73 591 aa16.21■□□□□ 0.19
RTN1-209ENST00000611068 H3BNX3 289 aa16.2■□□□□ 0.18
RTN1-209ENST00000611068 GOLGA8MH3BSY2 632 aa16.2■□□□□ 0.18
RTN1-209ENST00000611068 M0QYT0 321 aa16.2■□□□□ 0.18
RTN1-209ENST00000611068 EOMESO95936 686 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms