RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 SLC44A1Q8WWI5 657 aa12.07□□□□□ -0.48
CTCFL-217ENST00000608425 MOCOSQ96EN8 888 aa12.07□□□□□ -0.48
CTCFL-217ENST00000608425 ACO2Q99798 780 aaKnown RBP12.07□□□□□ -0.48
CTCFL-217ENST00000608425 TTYH2Q9BSA4 534 aa12.07□□□□□ -0.48
CTCFL-217ENST00000608425 TMEM39BQ9GZU3 492 aa12.07□□□□□ -0.48
CTCFL-217ENST00000608425 NOCTQ9UK39 431 aaKnown RBP12.07□□□□□ -0.48
CTCFL-217ENST00000608425 TESMINQ9Y4I5 508 aa12.07□□□□□ -0.48
CTCFL-217ENST00000608425 KBTBD13C9JR72 458 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 FAM189A1O60320 539 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 BCAS1O75363 584 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 BCAS2O75934 225 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 KRT8P05787 483 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 EEF1B2P24534 225 aaKnown RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 EPHX2P34913 555 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 ZNF76P36508 570 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 ELK3P41970 407 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 OR3A3P47888 321 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 SLC1A6P48664 564 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 IL1RL1Q01638 556 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 SLC9B1Q4ZJI4 515 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 FSCBQ5H9T9 825 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 MAMDC4Q6UXC1 1216 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 LMO3Q8TAP4 145 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 MAPK15Q8TD08 544 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 CPT1BQ92523 772 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 DPF3Q92784 378 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 OR2B2Q9GZK3 357 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 TOR3AQ9H497 397 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 GMPR2Q9P2T1 348 aaKnown RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 FZD1Q9UP38 647 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 ZNF195O14628 629 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 RFPL1O75677 317 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 DSTNP60981 165 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 TGFB2P61812 414 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 LSM3P62310 102 aaKnown RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 CCNA1P78396 465 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 C19orf57Q0VDD7 668 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 TMEM236Q5W0B7 351 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 PIGZQ86VD9 579 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 TPH2Q8IWU9 490 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 SLC22A15Q8IZD6 547 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 NDUFAF2Q8N183 169 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 PARP8Q8N3A8 854 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 CBR4Q8N4T8 237 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 CELF2-AS1Q8N7Q2 184 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 DACT3Q96B18 629 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 DEPDC7Q96QD5 511 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 OR52B2Q96RD2 323 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 ZSCAN5AQ9BUG6 496 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 C2orf40Q9H1Z8 148 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 PAQR5Q9NXK6 330 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 UBA2Q9UBT2 640 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-217ENST00000608425 DNMT3LQ9UJW3 386 aa12.06□□□□□ -0.48
CTCFL-217ENST00000608425 E2F8A0AVK6 867 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 WNT10BO00744 389 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 ACOX3O15254 700 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 SYNCRIPO60506 623 aaKnown RBP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 GSRP00390 522 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 ME2P23368 584 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 HTR2BP41595 481 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 PIGFQ07326 219 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 GRSF1Q12849 480 aaKnown RBP eCLIP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 BMT2Q1RMZ1 405 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 ATAD3CQ5T2N8 411 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 SLCO6A1Q86UG4 719 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 LDHDQ86WU2 507 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 SPARTQ8N0X7 666 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 KYQ8NBH2 561 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 JPH3Q8WXH2 748 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 HERVK_113Q902F9 699 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 HDAC11Q96DB2 347 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 YME1L1Q96TA2 773 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 SERPINI1Q99574 410 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 RNPEPQ9H4A4 650 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 VRTNQ9H8Y1 702 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 PPCSQ9HAB8 311 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 ATP13A2Q9NQ11 1180 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 C20orf96Q9NUD7 363 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 TMEM216Q9P0N5 145 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 AP3D1O14617 1153 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 ZBTB39O15060 712 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 GPC4O75487 556 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 PSMD10O75832 226 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 CFBP00751 764 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 KRT6AP02538 564 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 KRT6BP04259 564 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 TAL1P17542 331 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 CFL1P23528 166 aaKnown RBP12.05□□□□□ -0.48
CTCFL-217ENST00000608425 SLC9A3P48764 834 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 CXCL9Q07325 125 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 DPYSQ14117 519 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 CDK10Q15131 360 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 MROH9Q5TGP6 573 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 IDO2Q6ZQW0 420 aa12.05□□□□□ -0.48
CTCFL-217ENST00000608425 ADGRF2Q8IZF7 708 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms