RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 PPP1R32Q7Z5V6 425 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 RBM23Q86U06 439 aaKnown RBP4.34□□□□□ -1.71
LINC00343-210ENST00000608220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.34□□□□□ -1.71
LINC00343-210ENST00000608220 SEMA6DQ8NFY4 1073 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 BRIX1Q8TDN6 353 aaKnown RBP4.34□□□□□ -1.71
LINC00343-210ENST00000608220 CCDC12Q8WUD4 166 aaPredicted RBP4.34□□□□□ -1.71
LINC00343-210ENST00000608220 STAMQ92783 540 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 NELL2Q99435 816 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 MXRA8Q9BRK3 442 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 RHOBTB2Q9BYZ6 727 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 SERHLQ9NQF3 203 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 SSX2IPQ9Y2D8 614 aa4.34□□□□□ -1.71
LINC00343-210ENST00000608220 ZDBF2Q9HCK1 2354 aa4.34□□□□□ -1.72
LINC00343-210ENST00000608220 CACNA1HO95180 2353 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 IGKV6D-21A0A0A0MT36 114 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 C2CD4DB7Z1M9 353 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 E7EWF7 191 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 JTBO76095 146 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 KRT18P05783 430 aaKnown RBP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 POU2F2P09086 479 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 JUPP14923 745 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 AOC1P19801 751 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 SFPQP23246 707 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 DNAJB1P25685 340 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 MAGEA9P43362 315 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 ALDH7A1P49419 539 aaKnown RBP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 CLCN2P51788 898 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 EPHB1P54762 984 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 NAPAP54920 295 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 KRTAP10-11P60412 298 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 LONRF3Q496Y0 759 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 ATAT1Q5SQI0 421 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 ICE2Q659A1 982 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 SFRP4Q6FHJ7 346 aaPredicted RBP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 ZNF782Q6ZMW2 699 aaPredicted RBP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 FAM228AQ86W67 206 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 MB21D2Q8IYB1 491 aaPredicted RBP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 CCDC105Q8IYK2 499 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 PRR18Q8N4B5 295 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 SCARB1Q8WTV0 552 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 HSPBAP1Q96EW2 488 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 SCLT1Q96NL6 688 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 JPH2Q9BR39 696 aaPredicted RBP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 S1PR5Q9H228 398 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 POMKQ9H5K3 350 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 LY9Q9HBG7 655 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 ZNF302Q9NR11 478 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 CHST12Q9NRB3 414 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 AASDHPPTQ9NRN7 309 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 TBC1D22BQ9NU19 505 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 BCCIPQ9P287 314 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC00343-210ENST00000608220 IGSF9Q9P2J2 1179 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 SERTAD3Q9UJW9 196 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 PCDHA6Q9UN73 950 aa4.33□□□□□ -1.72
LINC00343-210ENST00000608220 ZMYM2Q9UBW7 1377 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CNTNAP2Q9UHC6 1331 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 A0A0U1RQF3 1178 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CCDC196A0A1B0GTZ2 297 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 ESYT2A0FGR8 921 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 IPO5O00410 1097 aaKnown RBP4.32□□□□□ -1.72
LINC00343-210ENST00000608220 SH2B2O14492 632 aaPredicted RBP4.32□□□□□ -1.72
LINC00343-210ENST00000608220 PER2O15055 1255 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 TLR5O60602 858 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 DKC1O60832 514 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC00343-210ENST00000608220 ATP9AO75110 1047 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 C22orf31O95567 290 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CYP21A2P08686 494 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CTSAP10619 480 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 PIM1P11309 404 aaPredicted RBP4.32□□□□□ -1.72
LINC00343-210ENST00000608220 KLRC1P26715 233 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 SFNP31947 248 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CA8P35219 290 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 ZNF134P52741 427 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 TDGQ13569 410 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 BRD3Q15059 726 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 PPP2R5AQ15172 486 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 UBE2SQ16763 222 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 PCID2Q5JVF3 399 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 ARHGAP40Q5TG30 622 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 PPP4R4Q6NUP7 873 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 TMTC3Q6ZXV5 915 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 ASCL5Q7RTU5 278 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 ZNF410Q86VK4 478 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 ECHDC2Q86YB7 292 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CCDC60Q8IWA6 550 aaPredicted RBP4.32□□□□□ -1.72
LINC00343-210ENST00000608220 GPR65Q8IYL9 337 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 SLC39A11Q8N1S5 342 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 FAM109AQ8N4B1 249 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 LRRC71Q8N4P6 559 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 TMEM105Q8N8V8 129 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 MRPL43Q8N983 215 aaKnown RBP4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CCDC148Q8NFR7 591 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 CMASQ8NFW8 434 aaPredicted RBP4.32□□□□□ -1.72
LINC00343-210ENST00000608220 VN1R2Q8NFZ6 395 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 RDM1Q8NG50 284 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 URGCPQ8TCY9 931 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 BICD2Q8TD16 824 aa4.32□□□□□ -1.72
LINC00343-210ENST00000608220 HDAC7Q8WUI4 952 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms