RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 NUMBP49757 651 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 WNT3AP56704 352 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 RFTN1Q14699 578 aaPredicted RBP21.92■■□□□ 1.1
USP6NL-204ENST00000606752 CERCAMQ5T4B2 595 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 KDELC1Q6UW63 502 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 RANBP10Q6VN20 620 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 SLC44A1Q8WWI5 657 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 USP13Q92995 863 aaPredicted RBP21.92■■□□□ 1.1
USP6NL-204ENST00000606752 FSD1LQ9BXM9 530 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 POLR1EQ9GZS1 481 aaKnown RBP21.92■■□□□ 1.1
USP6NL-204ENST00000606752 SLC28A3Q9HAS3 691 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 PSD3Q9NYI0 1048 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 SEPT3Q9UH03 358 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 A6NNZ2 444 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 MMP2P08253 660 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 GLDCP23378 1020 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 CD86P42081 329 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 NRIP1P48552 1158 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 DSC2Q02487 901 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 CDH18Q13634 790 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 TUBB8Q3ZCM7 444 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 COL13A1Q5TAT6 717 aaPredicted RBP21.91■■□□□ 1.1
USP6NL-204ENST00000606752 DENND5AQ6IQ26 1287 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 LRRC6Q86X45 466 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 ARRDC2Q8TBH0 407 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 DCAKDQ8WVC6 231 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 TTC17Q96AE7 1141 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 TADA1Q96BN2 335 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 FEM1AQ9BSK4 669 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 CNOT10Q9H9A5 744 aaKnown RBP21.91■■□□□ 1.1
USP6NL-204ENST00000606752 PIDD1Q9HB75 910 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 ACTL7BQ9Y614 415 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 IKBKGQ9Y6K9 419 aa21.91■■□□□ 1.1
USP6NL-204ENST00000606752 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.9■■□□□ 1.1
USP6NL-204ENST00000606752 CBX4O00257 560 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 ATP9BO43861 1147 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 TPH1P17752 444 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 CRYMQ14894 314 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 TRMT10BQ6PF06 316 aaKnown RBP21.9■■□□□ 1.1
USP6NL-204ENST00000606752 TMEM135Q86UB9 458 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 MFN1Q8IWA4 741 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 GDPD5Q8WTR4 605 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 PSKH2Q96QS6 385 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 CAPS2Q9BXY5 557 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 RPS6KL1Q9Y6S9 549 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 FAM159BA6NKW6 160 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 MZF1P28698 734 aaPredicted RBP21.9■■□□□ 1.1
USP6NL-204ENST00000606752 SPANXN3Q5MJ09 141 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 ALG1LQ6GMV1 187 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 CCDC117Q8IWD4 279 aaPredicted RBP21.9■■□□□ 1.1
USP6NL-204ENST00000606752 CTAGE3PQ8IX95 158 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 SMG7Q92540 1137 aaKnown RBP21.9■■□□□ 1.1
USP6NL-204ENST00000606752 BHMTQ93088 406 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 SEMA3CQ99985 751 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 MRPS23Q9Y3D9 190 aaKnown RBP21.9■■□□□ 1.1
USP6NL-204ENST00000606752 OR51B4Q9Y5P0 310 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 ACTL7AQ9Y615 435 aa21.9■■□□□ 1.1
USP6NL-204ENST00000606752 FAM237BA0A1B0GVD1 139 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 CXorf49A8MYA2 514 aaPredicted RBP21.89■■□□□ 1.09
USP6NL-204ENST00000606752 MUSKO15146 869 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 PAPLNO95428 1278 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 CYBBP04839 570 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 INHBAP08476 426 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 KRT15P19012 456 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 TPGS1Q6ZTW0 290 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 TRABD2AQ86V40 505 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 SLC26A11Q86WA9 606 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 PPM1NQ8N819 430 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 ALG14Q96F25 216 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 MGME1Q9BQP7 344 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 CINPQ9BW66 212 aaPredicted RBP21.89■■□□□ 1.09
USP6NL-204ENST00000606752 ARNT2Q9HBZ2 717 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 SOX13Q9UN79 622 aa21.89■■□□□ 1.09
USP6NL-204ENST00000606752 RANBP2P49792 3224 aaKnown RBP21.89■■□□□ 1.09
USP6NL-204ENST00000606752 FOXO6A8MYZ6 492 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 USP1O94782 785 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 PCSK7Q16549 785 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 RNF43Q68DV7 783 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 SRRM1Q8IYB3 904 aaKnown RBP21.88■■□□□ 1.09
USP6NL-204ENST00000606752 C12orf76Q8N812 135 aaPredicted RBP21.88■■□□□ 1.09
USP6NL-204ENST00000606752 WFDC5Q8TCV5 224 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 ZSWIM3Q96MP5 696 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 CDCA3Q99618 268 aaPredicted RBP21.88■■□□□ 1.09
USP6NL-204ENST00000606752 SMYD2Q9NRG4 433 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 SENP1Q9P0U3 644 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 VPS28Q9UK41 221 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 NOTCH4Q99466 2003 aa21.88■■□□□ 1.09
USP6NL-204ENST00000606752 TTC24A2A3L6 582 aaPredicted RBP21.87■■□□□ 1.09
USP6NL-204ENST00000606752 EPOPA6NHQ4 379 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 ZMPSTE24O75844 475 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 PRAMEF12O95522 483 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 TCF3P15923 654 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 CEBPBP17676 345 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 MDH1P40925 334 aaKnown RBP21.87■■□□□ 1.09
USP6NL-204ENST00000606752 ARF5P84085 180 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 KCNC3Q14003 757 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 FRG1Q14331 258 aaKnown RBP21.87■■□□□ 1.09
USP6NL-204ENST00000606752 IHHQ14623 411 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 ANKRD20A4Q4UJ75 823 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 PCID2Q5JVF3 399 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms