RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 KLHDC7BQ96G42 594 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 MYOCQ99972 504 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 C11orf70Q9BRQ4 267 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 CEP44Q9C0F1 390 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 ZNF212Q9UDV6 495 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 CA5BQ9Y2D0 317 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 DAAM1Q9Y4D1 1078 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 ATRXP46100 2492 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 URB1O60287 2271 aaKnown RBP19.12■□□□□ 0.65
PNKP-213ENST00000599543 LEFTY1O75610 366 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 PCDH8O95206 1070 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 C1SP09871 688 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 SLC20A2Q08357 652 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 SFMBT2Q5VUG0 894 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 TRIM72Q6ZMU5 477 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 PHLDB2Q86SQ0 1253 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 HORMAD1Q86X24 394 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 PDCD7Q8N8D1 485 aaKnown RBP19.11■□□□□ 0.65
PNKP-213ENST00000599543 TMEM145Q8NBT3 493 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 SLC30A5Q8TAD4 765 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 KLK6Q92876 244 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 HDAC8Q9BY41 377 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 DKK4Q9UBT3 224 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 OR12D3Q9UGF7 316 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 GPSM3Q9Y4H4 160 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 MYLKQ15746 1914 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 LOC400499M0QZD8 3231 aa19.11■□□□□ 0.65
PNKP-213ENST00000599543 TRABD2BA6NFA1 517 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 SDC3O75056 442 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 ZMPSTE24O75844 475 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 THEGLP0DJG4 465 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 AKT2P31751 481 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 ETFBP38117 255 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 NSFP46459 744 aaKnown RBP19.1■□□□□ 0.65
PNKP-213ENST00000599543 ACADVLP49748 655 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 DNA2P51530 1060 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 ARF5P84085 180 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 C15orf59Q2T9L4 293 aaPredicted RBP19.1■□□□□ 0.65
PNKP-213ENST00000599543 CCDC14Q49A88 953 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 ARTNQ5T4W7 220 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 RWDD4Q6NW29 188 aaKnown RBP19.1■□□□□ 0.65
PNKP-213ENST00000599543 PCDH20Q8N6Y1 951 aaKnown RBP19.1■□□□□ 0.65
PNKP-213ENST00000599543 RXFP2Q8WXD0 754 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 PCDHB18PQ96TA0 734 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 TTYH3Q9C0H2 523 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 SEPT11Q9NVA2 429 aaKnown RBP19.1■□□□□ 0.65
PNKP-213ENST00000599543 RAXQ9Y2V3 346 aa19.1■□□□□ 0.65
PNKP-213ENST00000599543 ZNF821O75541 412 aaPredicted RBP19.09■□□□□ 0.65
PNKP-213ENST00000599543 HNRNPA2B1P22626 353 aaKnown RBP19.09■□□□□ 0.65
PNKP-213ENST00000599543 ADRA1BP35368 520 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 NEK3P51956 506 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 NRG1Q02297 640 aaPredicted RBP19.09■□□□□ 0.65
PNKP-213ENST00000599543 CYP4F3Q08477 520 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 CAMK2BQ13554 666 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 ASIC2Q16515 512 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 ZNF284Q2VY69 593 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 HEPHQ9BQS7 1158 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 FZD3Q9NPG1 666 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 FCF1Q9Y324 198 aaKnown RBP19.09■□□□□ 0.65
PNKP-213ENST00000599543 WASF2Q9Y6W5 498 aa19.09■□□□□ 0.65
PNKP-213ENST00000599543 C2CD4BA6NLJ0 364 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 RNF103O00237 685 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 SKILP12757 684 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 ADRB3P13945 408 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 JUPP14923 745 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 ITGB7P26010 798 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 PTPN9P43378 593 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 MAPKAPK2P49137 400 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 CCNHP51946 323 aaPredicted RBP19.08■□□□□ 0.64
PNKP-213ENST00000599543 GEMIN4P57678 1058 aaKnown RBP19.08■□□□□ 0.64
PNKP-213ENST00000599543 RAB6CQ53S08 254 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 HS1BP3Q53T59 392 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 CARD16Q5EG05 197 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 MANEALQ5VSG8 457 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 FBXL19Q6PCT2 694 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 C19orf48Q6RUI8 117 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 STRADAQ7RTN6 431 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 KANSL1Q7Z3B3 1105 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 IRF2BP2Q7Z5L9 587 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 JOSD2Q8TAC2 188 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 TSC1Q92574 1164 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 CALN1Q9BXU9 219 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 RAB6CQ9H0N0 254 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 RETREG1Q9H6L5 497 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 ZDHHC6Q9H6R6 413 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 HPCAL4Q9UM19 191 aa19.08■□□□□ 0.64
PNKP-213ENST00000599543 CXorf51AA0A1B0GTR3 108 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 GJB6O95452 261 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 KRT3P12035 628 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 UNGP13051 313 aaPredicted RBP19.07■□□□□ 0.64
PNKP-213ENST00000599543 FERP16591 822 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 RHOQP17081 205 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 CKMT2P17540 419 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 ACVRL1P37023 503 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 ILKQ13418 452 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 HES3Q5TGS1 186 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 SEL1L3Q68CR1 1132 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 KIAA1161Q6NSJ0 714 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 DNAAF5Q86Y56 855 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 RYBPQ8N488 228 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms