RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ERICH1Q86X53 443 aa15.05■□□□□ -0
PNKP-202ENST00000593706 SPACA3Q8IXA5 215 aa15.05■□□□□ -0
PNKP-202ENST00000593706 SLC22A18ASQ8N1D0 253 aa15.05■□□□□ -0
PNKP-202ENST00000593706 ZNF248Q8NDW4 579 aa15.05■□□□□ -0
PNKP-202ENST00000593706 ZNF397Q8NF99 534 aaPredicted RBP15.05■□□□□ -0
PNKP-202ENST00000593706 NAF1Q96HR8 494 aaKnown RBP15.05■□□□□ -0
PNKP-202ENST00000593706 DEPDC7Q96QD5 511 aa15.05■□□□□ -0
PNKP-202ENST00000593706 NPY6RQ99463 290 aa15.05■□□□□ -0
PNKP-202ENST00000593706 ARHGEF38Q9NXL2 777 aa15.05■□□□□ -0
PNKP-202ENST00000593706 NLGN3Q9NZ94 848 aa15.05■□□□□ -0
PNKP-202ENST00000593706 SIK3Q9Y2K2 1263 aa15.05■□□□□ -0
PNKP-202ENST00000593706 SNX10Q9Y5X0 201 aa15.05■□□□□ -0
PNKP-202ENST00000593706 A0A0D9SEW6 157 aa15.04■□□□□ -0
PNKP-202ENST00000593706 TEX51A0A1B0GUA7 166 aa15.04■□□□□ -0
PNKP-202ENST00000593706 OPA1O60313 960 aa15.04■□□□□ -0
PNKP-202ENST00000593706 LEFTY1O75610 366 aa15.04■□□□□ -0
PNKP-202ENST00000593706 F9P00740 461 aa15.04■□□□□ -0
PNKP-202ENST00000593706 CKMT1AP12532 417 aa15.04■□□□□ -0
PNKP-202ENST00000593706 CYP11B1P15538 503 aa15.04■□□□□ -0
PNKP-202ENST00000593706 TFE3P19532 575 aaPredicted RBP15.04■□□□□ -0
PNKP-202ENST00000593706 KLK7P49862 253 aa15.04■□□□□ -0
PNKP-202ENST00000593706 HNRNPKP61978 463 aaKnown RBP eCLIP15.04■□□□□ -0
PNKP-202ENST00000593706 GABREP78334 506 aa15.04■□□□□ -0
PNKP-202ENST00000593706 TLE3Q04726 772 aa15.04■□□□□ -0
PNKP-202ENST00000593706 FAM102AQ5T9C2 384 aaPredicted RBP15.04■□□□□ -0
PNKP-202ENST00000593706 KIAA1161Q6NSJ0 714 aa15.04■□□□□ -0
PNKP-202ENST00000593706 RETSATQ6NUM9 610 aa15.04■□□□□ -0
PNKP-202ENST00000593706 SASS6Q6UVJ0 657 aa15.04■□□□□ -0
PNKP-202ENST00000593706 APOLD1Q96LR9 279 aa15.04■□□□□ -0
PNKP-202ENST00000593706 TBCBQ99426 244 aa15.04■□□□□ -0
PNKP-202ENST00000593706 SPON2Q9BUD6 331 aa15.04■□□□□ -0
PNKP-202ENST00000593706 HDAC8Q9BY41 377 aa15.04■□□□□ -0
PNKP-202ENST00000593706 ABCG4Q9H172 646 aa15.04■□□□□ -0
PNKP-202ENST00000593706 ATP13A1Q9HD20 1204 aa15.04■□□□□ -0
PNKP-202ENST00000593706 ANLNQ9NQW6 1124 aa15.04■□□□□ -0
PNKP-202ENST00000593706 MPP6Q9NZW5 540 aa15.04■□□□□ -0
PNKP-202ENST00000593706 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
PNKP-202ENST00000593706 ZFR2Q9UPR6 939 aaKnown RBP15.04■□□□□ -0
PNKP-202ENST00000593706 FAM170AA1A519 330 aa15.03■□□□□ -0
PNKP-202ENST00000593706 LRRC10BA6NIK2 292 aa15.03■□□□□ -0
PNKP-202ENST00000593706 LGALS16A8MUM7 142 aa15.03■□□□□ -0
PNKP-202ENST00000593706 H3BM21 787 aa15.03■□□□□ -0
PNKP-202ENST00000593706 SRGAP2O75044 1071 aa15.03■□□□□ -0
PNKP-202ENST00000593706 USP12O75317 370 aa15.03■□□□□ -0
PNKP-202ENST00000593706 CSO75390 466 aaKnown RBP15.03■□□□□ -0
PNKP-202ENST00000593706 C1QL1O75973 258 aa15.03■□□□□ -0
PNKP-202ENST00000593706 NEBLO76041 1014 aa15.03■□□□□ -0
PNKP-202ENST00000593706 ZIC2O95409 532 aaPredicted RBP15.03■□□□□ -0
PNKP-202ENST00000593706 MPOP05164 745 aa15.03■□□□□ -0
PNKP-202ENST00000593706 ADRB3P13945 408 aa15.03■□□□□ -0
PNKP-202ENST00000593706 DUSP3P51452 185 aaPredicted RBP15.03■□□□□ -0
PNKP-202ENST00000593706 DNA2P51530 1060 aa15.03■□□□□ -0
PNKP-202ENST00000593706 JAM2P57087 298 aa15.03■□□□□ -0
PNKP-202ENST00000593706 RPS21P63220 83 aaKnown RBP15.03■□□□□ -0
PNKP-202ENST00000593706 TYRO3Q06418 890 aa15.03■□□□□ -0
PNKP-202ENST00000593706 RAPGEF1Q13905 1077 aa15.03■□□□□ -0
PNKP-202ENST00000593706 TMEM259Q4ZIN3 620 aa15.03■□□□□ -0
PNKP-202ENST00000593706 ZNF542PQ5EBM4 170 aa15.03■□□□□ -0
PNKP-202ENST00000593706 BROXQ5VW32 411 aa15.03■□□□□ -0
PNKP-202ENST00000593706 DPY19L3Q6ZPD9 716 aa15.03■□□□□ -0
PNKP-202ENST00000593706 Q6ZSR6 202 aa15.03■□□□□ -0
PNKP-202ENST00000593706 ABI3BPQ7Z7G0 1075 aa15.03■□□□□ -0
PNKP-202ENST00000593706 DCP2Q8IU60 420 aaKnown RBP15.03■□□□□ -0
PNKP-202ENST00000593706 TMEM35BQ8NCS4 154 aa15.03■□□□□ -0
PNKP-202ENST00000593706 OR7D4Q8NG98 312 aa15.03■□□□□ -0
PNKP-202ENST00000593706 FAM174AQ8TBP5 190 aa15.03■□□□□ -0
PNKP-202ENST00000593706 EPS8L1Q8TE68 723 aa15.03■□□□□ -0
PNKP-202ENST00000593706 IFT43Q96FT9 208 aa15.03■□□□□ -0
PNKP-202ENST00000593706 DUSP23Q9BVJ7 150 aa15.03■□□□□ -0
PNKP-202ENST00000593706 STK33Q9BYT3 514 aa15.03■□□□□ -0
PNKP-202ENST00000593706 VPS16Q9H269 839 aa15.03■□□□□ -0
PNKP-202ENST00000593706 ZDHHC6Q9H6R6 413 aa15.03■□□□□ -0
PNKP-202ENST00000593706 CAAP1Q9H8G2 361 aa15.03■□□□□ -0
PNKP-202ENST00000593706 TMPRSS4Q9NRS4 437 aa15.03■□□□□ -0
PNKP-202ENST00000593706 NOCTQ9UK39 431 aaKnown RBP15.03■□□□□ -0
PNKP-202ENST00000593706 BOD1L1Q8NFC6 3051 aa15.03■□□□□ -0
PNKP-202ENST00000593706 I6L893 689 aaPredicted RBP15.02■□□□□ -0
PNKP-202ENST00000593706 RNF103O00237 685 aa15.02■□□□□ -0
PNKP-202ENST00000593706 SCAMP1O15126 338 aa15.02■□□□□ -0
PNKP-202ENST00000593706 GP1BAP07359 652 aa15.02■□□□□ -0
PNKP-202ENST00000593706 MYF5P13349 255 aa15.02■□□□□ -0
PNKP-202ENST00000593706 ITGB7P26010 798 aa15.02■□□□□ -0
PNKP-202ENST00000593706 SERPINH1P50454 418 aaKnown RBP15.02■□□□□ -0
PNKP-202ENST00000593706 COPB1P53618 953 aaKnown RBP15.02■□□□□ -0
PNKP-202ENST00000593706 TMPRSS3P57727 454 aa15.02■□□□□ -0
PNKP-202ENST00000593706 BPIFB4P59827 614 aa15.02■□□□□ -0
PNKP-202ENST00000593706 SLC25A52Q3SY17 297 aa15.02■□□□□ -0
PNKP-202ENST00000593706 ACBD5Q5T8D3 534 aaPredicted RBP15.02■□□□□ -0
PNKP-202ENST00000593706 KYAT3Q6YP21 454 aaKnown RBP15.02■□□□□ -0
PNKP-202ENST00000593706 NOP9Q86U38 636 aaKnown RBP15.02■□□□□ -0
PNKP-202ENST00000593706 PARGQ86W56 976 aa15.02■□□□□ -0
PNKP-202ENST00000593706 ZNF683Q8IZ20 524 aa15.02■□□□□ -0
PNKP-202ENST00000593706 LSMEM2Q8N112 164 aa15.02■□□□□ -0
PNKP-202ENST00000593706 PCDH20Q8N6Y1 951 aaKnown RBP15.02■□□□□ -0
PNKP-202ENST00000593706 LSM14AQ8ND56 463 aaKnown RBP15.02■□□□□ -0
PNKP-202ENST00000593706 ZNF548Q8NEK5 533 aaPredicted RBP15.02■□□□□ -0
PNKP-202ENST00000593706 IFI44Q8TCB0 444 aa15.02■□□□□ -0
PNKP-202ENST00000593706 MAPK15Q8TD08 544 aa15.02■□□□□ -0
PNKP-202ENST00000593706 PGAP3Q96FM1 320 aaPredicted RBP15.02■□□□□ -0
PNKP-202ENST00000593706 ZNF578Q96N58 590 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms