RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 MAGEC1O60732 1142 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 MYBL1P10243 752 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 ACVRL1P37023 503 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 ACAP1Q15027 740 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 SHBQ15464 509 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 PARP15Q460N3 678 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 SETMARQ53H47 684 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-207ENST00000592839 CARD16Q5EG05 197 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 EFHC2Q5JST6 749 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 SFMBT2Q5VUG0 894 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 UNQ6494/PRO21346Q6UXR6 183 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 LINGO4Q6UY18 593 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-207ENST00000592839 CYP4V2Q6ZWL3 525 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-207ENST00000592839 ERN2Q76MJ5 926 aaKnown RBP15.15■□□□□ 0.02
SF3A2-207ENST00000592839 KANSL1Q7Z3B3 1105 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 PRPF39Q86UA1 669 aaKnown RBP15.15■□□□□ 0.02
SF3A2-207ENST00000592839 GANCQ8TET4 914 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 ASB12Q8WXK4 309 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 ARRDC3Q96B67 414 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 HEPHQ9BQS7 1158 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 CBX8Q9HC52 389 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 BZW2Q9Y6E2 419 aaKnown RBP15.15■□□□□ 0.02
SF3A2-207ENST00000592839 ATRXP46100 2492 aa15.15■□□□□ 0.02
SF3A2-207ENST00000592839 ZFHX4Q86UP3 3567 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3DA0A087WVF3 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3IA0A087WXS9 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3EA0A087X179 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3KA0A087X1G2 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 SPAARA0A1B0GVQ0 90 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3FA6NER0 549 aaPredicted RBP15.14■□□□□ 0.01
SF3A2-207ENST00000592839 C1QTNF9BB2RNN3 333 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3LB9A6J9 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 PRAMEF26H0Y7S4 382 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 RNF103O00237 685 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 WNT9AO14904 365 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3HP0C7X1 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 C1QTNF9P0C862 333 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TNFAIP3P21580 790 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 RECQLP46063 649 aaPredicted RBP15.14■□□□□ 0.01
SF3A2-207ENST00000592839 CCNHP51946 323 aaPredicted RBP15.14■□□□□ 0.01
SF3A2-207ENST00000592839 ASIC2Q16515 512 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 SLC45A4Q5BKX6 768 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3GQ6DHY5 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3CQ6IPX1 549 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 HORMAD1Q86X24 394 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 DRC7Q8IY82 874 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TBC1D3Q8IZP1 549 aaPredicted RBP15.14■□□□□ 0.01
SF3A2-207ENST00000592839 ARFGAP1Q8N6T3 406 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 CHST14Q8NCH0 376 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 OR2AP1Q8NGE2 309 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 SAP25Q8TEE9 199 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 RAB7BQ96AH8 199 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 TRIM11Q96F44 468 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 SERAC1Q96JX3 654 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 CAMK1GQ96NX5 476 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 EPAS1Q99814 870 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 OSBPL1AQ9BXW6 950 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 MAGEB5Q9BZ81 275 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 LRRC19Q9H756 370 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 CATSPERBQ9H7T0 1116 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 PDFQ9HBH1 243 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 GDF3Q9NR23 364 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 SCINQ9Y6U3 715 aa15.14■□□□□ 0.01
SF3A2-207ENST00000592839 PLXNB3Q9ULL4 1909 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 KNTC1P50748 2209 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 ZFYVE26Q68DK2 2539 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 DMXL2Q8TDJ6 3036 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 SYCE3A1L190 88 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 FAM47DPA6NHR8 397 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 TLR4O00206 839 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 LEFTY1O75610 366 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 CAPNS1P04632 268 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 FTH1P19P0C7X4 201 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 DESP17661 470 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 EPHA8P29322 1005 aaPredicted RBP15.13■□□□□ 0.01
SF3A2-207ENST00000592839 EPHB2P29323 1055 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 HNRNPH3P31942 346 aaKnown RBP15.13■□□□□ 0.01
SF3A2-207ENST00000592839 PCK1P35558 622 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 HCAR3P49019 387 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 NEK3P51956 506 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 C21orf59P57076 290 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 FANCCQ00597 558 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 POLD3Q15054 466 aaPredicted RBP15.13■□□□□ 0.01
SF3A2-207ENST00000592839 ZNF284Q2VY69 593 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 INAVAQ3KP66 663 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 AFMIDQ63HM1 303 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 KIAA1161Q6NSJ0 714 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 DCUN1D2Q6PH85 259 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 LAYNQ6UX15 382 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 ABI3BPQ7Z7G0 1075 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 PHLDB2Q86SQ0 1253 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 IFT43Q96FT9 208 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 SCNM1Q9BWG6 230 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 SEPT11Q9NVA2 429 aaKnown RBP15.13■□□□□ 0.01
SF3A2-207ENST00000592839 NENFQ9UMX5 172 aa15.13■□□□□ 0.01
SF3A2-207ENST00000592839 APOBEC2Q9Y235 224 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms