RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SPATA9Q9BWV2 254 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 LZTFL1Q9NQ48 299 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 ABCB8Q9NUT2 735 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 DEC1Q9P2X7 70 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 LCMT1Q9UIC8 334 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 FZD10Q9ULW2 581 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 USP18Q9UMW8 372 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 PCDHB10Q9UN67 800 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 MRPS17Q9Y2R5 130 aaKnown RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 LRRD1A4D1F6 860 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 GRID2IPA4D2P6 1211 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CHURC1-FNTBB4DL54 471 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 PI4K2BG5E9Z4 385 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 FAM72CH0Y354 149 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 EEF2KO00418 725 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 MAN2B1O00754 1011 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TRIM24O15164 1050 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 DAPK3O43293 454 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 KRT86O43790 486 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TULP3O75386 442 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CNTN5O94779 1100 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 LRIG2O94898 1065 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ENDOD1O94919 500 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 LUC7L3O95232 432 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 FTCDO95954 541 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 EGFP01133 1207 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 RHOCP08134 193 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 KRT7P08729 469 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 COMTP21964 271 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 IL1R2P27930 398 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 EPHB2P29323 1055 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 PCK1P35558 622 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ARL4AP40617 200 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 OPRD1P41143 372 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 SLC6A11P48066 632 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 AIF1P55008 147 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TAS2R40P59535 323 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 MESP2Q0VG99 397 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 GRSF1Q12849 480 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 EIF4EBP2Q13542 120 aaPredicted RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 LRRC32Q14392 662 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 IFI16Q16666 785 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CA9Q16790 459 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 PLEKHG6Q3KR16 790 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 FAM72AQ5TYM5 149 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CWF19L1Q69YN2 538 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TXNRD3NBQ6F5E7 133 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 FAM72DQ6L9T8 149 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 FSTL4Q6MZW2 842 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 KIAA1211LQ6NV74 962 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 FBXL22Q6P050 247 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 C1orf228Q6PIY5 440 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 Q6ZS52 159 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CYP4V2Q6ZWL3 525 aaPredicted RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 FAM72BQ86X60 149 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 SFTPA1Q8IWL2 248 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 SUGP1Q8IWZ8 645 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CCAR2Q8N163 923 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ARFGAP1Q8N6T3 406 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TERB1Q8NA31 727 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 PJA1Q8NG27 643 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 KLHL6Q8WZ60 621 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 IGSF8Q969P0 613 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TMA16Q96EY4 203 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 P2RY11Q96G91 374 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ALS2CR12Q96Q35 445 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 HAPLN3Q96S86 360 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 PNKPQ96T60 521 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 PRMT1Q99873 361 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 NCAPGQ9BPX3 1015 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CALN1Q9BXU9 219 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CIPCQ9C0C6 399 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ZYG11BQ9C0D3 744 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 LTB4R2Q9NPC1 389 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ZDHHC4Q9NPG8 344 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TRPV5Q9NQA5 729 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 RBM12Q9NTZ6 932 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 TMEM51Q9NW97 253 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 DDX56Q9NY93 547 aaKnown RBP6.57□□□□□ -1.36
VPS4B-205ENST00000591383 MPP6Q9NZW5 540 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 WNT16Q9UBV4 365 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 OR12D3Q9UGF7 316 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 GGA2Q9UJY4 613 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 STOML2Q9UJZ1 356 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 GUCA1BQ9UMX6 200 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 PPP2R2CQ9Y2T4 447 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 CAPN6Q9Y6Q1 641 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 DUSP10Q9Y6W6 482 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ATG2BQ96BY7 2078 aa6.57□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 KANSL1LA0AUZ9 987 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PRAMEF27A3QJZ7 478 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 TBC1D3BA6NDS4 549 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 BTNL10A8MVZ5 291 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 TM4SF5O14894 197 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 FGF10O15520 208 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PJA2O43164 708 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PSTPIP1O43586 416 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 SUSD5O60279 629 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CLDN11O75508 207 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms