RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 GPSM3Q9Y4H4 160 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 HS3ST3A1Q9Y663 406 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 DOCK4Q8N1I0 1966 aa12.46□□□□□ -0.41
VAT1-206ENST00000589709 ARID1BQ8NFD5 2236 aaPredicted RBP12.46□□□□□ -0.42
VAT1-206ENST00000589709 FAM149AA5PLN7 773 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 SIGLEC16A6NMB1 481 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 LGALS16A8MUM7 142 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 FAM72CH0Y354 149 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 AP1G1O43747 822 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 LRIG2O94898 1065 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 PCDH8O95206 1070 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 CALB1P05937 261 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 THEGLP0DJG4 465 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 PRLRP16471 622 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 CKMT2P17540 419 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 AKT2P31751 481 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 RFC1P35251 1148 aaPredicted RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 ACVRL1P37023 503 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 CCNHP51946 323 aaPredicted RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 NEK3P51956 506 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 HDAC4P56524 1084 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 RPS21P63220 83 aaKnown RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 MYL5Q02045 173 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 DNAJC3Q13217 504 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 ZNF211Q13398 564 aaPredicted RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 CDO1Q16878 200 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 CLEC16AQ2KHT3 1053 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 FAM72AQ5TYM5 149 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 FAM72DQ6L9T8 149 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 KIAA1161Q6NSJ0 714 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 SASS6Q6UVJ0 657 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 ABI3BPQ7Z7G0 1075 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 FAM72BQ86X60 149 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 DCP2Q8IU60 420 aaKnown RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 CACTIN-AS1Q8N1I8 211 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 SLC25A45Q8N413 288 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 NEK11Q8NG66 645 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 ARHGEF2Q92974 986 aaKnown RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 FEM1CQ96JP0 617 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 ERGIC2Q96RQ1 377 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 ZFR2Q9UPR6 939 aaKnown RBP12.45□□□□□ -0.42
VAT1-206ENST00000589709 CA5BQ9Y2D0 317 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 CACNA1GO43497 2377 aa12.45□□□□□ -0.42
VAT1-206ENST00000589709 ADRB3P13945 408 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 JUPP14923 745 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 GPD1P21695 349 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 ACP1P24666 158 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 HNF1BP35680 557 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 DNA2P51530 1060 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 UBXN1Q04323 297 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
VAT1-206ENST00000589709 CYP4F3Q08477 520 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 STX1AQ16623 288 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 PROX2Q3B8N5 592 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 SEL1L3Q68CR1 1132 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 RWDD4Q6NW29 188 aaKnown RBP12.44□□□□□ -0.42
VAT1-206ENST00000589709 FBXL19Q6PCT2 694 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 WDR59Q6PJI9 974 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 PHLDB2Q86SQ0 1253 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 MARCH9Q86YJ5 346 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 FAM172AQ8WUF8 416 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 ASB12Q8WXK4 309 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 KLK6Q92876 244 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 RAB7BQ96AH8 199 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
VAT1-206ENST00000589709 SELENOOQ9BVL4 669 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 SLC17A9Q9BYT1 436 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 NDFIP2Q9NV92 336 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 HECAQ9UBI9 543 aaPredicted RBP12.44□□□□□ -0.42
VAT1-206ENST00000589709 HPCAL4Q9UM19 191 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 NEU3Q9UQ49 428 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
VAT1-206ENST00000589709 FADS3Q9Y5Q0 445 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 DOCK9Q9BZ29 2069 aa12.44□□□□□ -0.42
VAT1-206ENST00000589709 URB1O60287 2271 aaKnown RBP12.44□□□□□ -0.42
VAT1-206ENST00000589709 TP53BP1Q12888 1972 aaPredicted RBP12.43□□□□□ -0.42
VAT1-206ENST00000589709 ITPR1Q14643 2758 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 WDFY3Q8IZQ1 3526 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 TCRBV5S1A1TA0A578 114 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 ZSCAN5CA6NGD5 496 aaPredicted RBP12.43□□□□□ -0.42
VAT1-206ENST00000589709 TRIM38O00635 465 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 TSPAN6O43657 245 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 KDELR3O43731 214 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 RAMP2O60895 175 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 GJB6O95452 261 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 POP4O95707 220 aaKnown RBP12.43□□□□□ -0.42
VAT1-206ENST00000589709 GSRP00390 522 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 DGKAP23743 735 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 ZNF143P52747 638 aaPredicted RBP12.43□□□□□ -0.42
VAT1-206ENST00000589709 NCAPHQ15003 741 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 POLD3Q15054 466 aaPredicted RBP12.43□□□□□ -0.42
VAT1-206ENST00000589709 GCNT7Q6ZNI0 430 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 MON1BQ7L1V2 547 aa12.43□□□□□ -0.42
VAT1-206ENST00000589709 APTXQ7Z2E3 356 aaKnown RBP12.43□□□□□ -0.42
VAT1-206ENST00000589709 SLFN11Q7Z7L1 901 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms