RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 BECN2A8MW95 431 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 M0QYT0 321 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 NEBLO76041 1014 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 CSF2P04141 144 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 NME1P15531 152 aaKnown RBP13.85□□□□□ -0.19
SS18-222ENST00000582792 NOS2P35228 1153 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 MYL5Q02045 173 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 VAC14Q08AM6 782 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 FZD2Q14332 565 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 C3orf38Q5JPI3 329 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 BRMS1LQ5PSV4 323 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 OTUD1Q5VV17 481 aaPredicted RBP13.85□□□□□ -0.19
SS18-222ENST00000582792 KIAA1161Q6NSJ0 714 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 ZCCHC8Q6NZY4 707 aaKnown RBP13.85□□□□□ -0.19
SS18-222ENST00000582792 C22orf39Q6P5X5 142 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 GJB7Q6PEY0 223 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 SLC26A9Q7LBE3 791 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 SETD3Q86TU7 594 aaPredicted RBP13.85□□□□□ -0.19
SS18-222ENST00000582792 PASD1Q8IV76 773 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 ZNF683Q8IZ20 524 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 ZNF548Q8NEK5 533 aaPredicted RBP13.85□□□□□ -0.19
SS18-222ENST00000582792 GRIN3AQ8TCU5 1115 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 TTC9Q92623 222 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 GRAMD1AQ96CP6 724 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 FAM81BQ96LP2 452 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 SLC17A9Q9BYT1 436 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 SEMA4CQ9C0C4 833 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 TNKS2Q9H2K2 1166 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 ANLNQ9NQW6 1124 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 PIGVQ9NUD9 493 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 ARHGEF38Q9NXL2 777 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 NCKIPSDQ9NZQ3 722 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 TRPM6Q9BX84 2022 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 A0A0D9SEW6 157 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 SPTY2D1-AS1A0A0U1RR47 76 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 A0A1W2PNU3 283 aaPredicted RBP13.84□□□□□ -0.19
SS18-222ENST00000582792 DRGXA6NNA5 263 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 SMTNL1A8MU46 457 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
SS18-222ENST00000582792 LEFTY1O75610 366 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 ADCY5O95622 1261 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 ERBB2P04626 1255 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 TGM2P21980 687 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 EEF1GP26641 437 aaKnown RBP13.84□□□□□ -0.19
SS18-222ENST00000582792 RECQLP46063 649 aaPredicted RBP13.84□□□□□ -0.19
SS18-222ENST00000582792 NEK3P51956 506 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 RPS21P63220 83 aaKnown RBP13.84□□□□□ -0.19
SS18-222ENST00000582792 SKOR1P84550 965 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 SLC6A3Q01959 620 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
SS18-222ENST00000582792 FGL2Q14314 439 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 ANO6Q4KMQ2 910 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 TRIM65Q6PJ69 517 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 LINGO4Q6UY18 593 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 DPY19L3Q6ZPD9 716 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 PARGQ86W56 976 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 ZNF397Q8NF99 534 aaPredicted RBP13.84□□□□□ -0.19
SS18-222ENST00000582792 NPY6RQ99463 290 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 TKTL2Q9H0I9 626 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 WDCPQ9H6R7 721 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 RRN3Q9NYV6 651 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 WASF2Q9Y6W5 498 aa13.84□□□□□ -0.19
SS18-222ENST00000582792 EME2A4GXA9 379 aaPredicted RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 H3BM21 787 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 I6L893 689 aaPredicted RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 RAD51BO15315 384 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 ZNF821O75541 412 aaPredicted RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 PAK4O96013 591 aaPredicted RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 C6P13671 934 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 ADRB3P13945 408 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 ITGB7P26010 798 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 RBMS1P29558 406 aaKnown RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 L1CAMP32004 1257 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 USP8P40818 1118 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 RABIFP47224 123 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 CXCR3P49682 368 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 SNX16P57768 344 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 LY6DQ14210 128 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 CDKN3Q16667 212 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 ARHGAP44Q17R89 818 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 CDKAL1Q5VV42 579 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 GUSBP11Q6P575 273 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 TFAP2DQ7Z6R9 452 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 ZSCAN30Q86W11 494 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 C1orf131Q8NDD1 294 aaKnown RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 CCDC97Q96F63 343 aaPredicted RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 ATXN7L3BQ96GX2 97 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 FEM1CQ96JP0 617 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 SLC46A1Q96NT5 459 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 LENG8Q96PV6 779 aaPredicted RBP13.83□□□□□ -0.2
SS18-222ENST00000582792 CRACR2AQ9BSW2 395 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 CEP44Q9C0F1 390 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 SALL4Q9UJQ4 1053 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 PCDHGA8Q9Y5G5 932 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 ENTPD2Q9Y5L3 495 aa13.83□□□□□ -0.2
SS18-222ENST00000582792 FADS3Q9Y5Q0 445 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms