RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 JAK1P23458 1154 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 AVPR1AP37288 418 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 NAB1Q13506 487 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 LRP8Q14114 963 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 FAM219BQ5XKK7 198 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 HMGCLL1Q8TB92 370 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 WNK4Q96J92 1243 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 QKIQ96PU8 341 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMG6-215ENST00000574501 MRIQ9BWK5 157 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 ZFYVE28Q9HCC9 887 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 DTLQ9NZJ0 730 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 SLC39A10Q9ULF5 831 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 AQP9O43315 295 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 TPD52L2O43399 206 aaKnown RBP14.6□□□□□ -0.07
SMG6-215ENST00000574501 KDM1AO60341 852 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 NOL3O60936 208 aaKnown RBP14.6□□□□□ -0.07
SMG6-215ENST00000574501 MLNP12872 115 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 CCNA2P20248 432 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 PSMB4P28070 264 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 PLCL1Q15111 1095 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 AGKQ53H12 422 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 DHFR2Q86XF0 187 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 STARD8Q92502 1023 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 ZNF670Q9BS34 389 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 SPAG4Q9NPE6 437 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 UTP6Q9NYH9 597 aaKnown RBP14.6□□□□□ -0.07
SMG6-215ENST00000574501 ST14Q9Y5Y6 855 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 A0A0A0MRY4 1105 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 CLOCKO15516 846 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 PHGDHO43175 533 aaKnown RBP14.6□□□□□ -0.07
SMG6-215ENST00000574501 MPOP05164 745 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 HOXC6P09630 235 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 ATP6V1B2P21281 511 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 RCVRNP35243 200 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 POLR2IP36954 125 aaKnown RBP14.6□□□□□ -0.07
SMG6-215ENST00000574501 TRAP1Q12931 704 aaKnown RBP14.6□□□□□ -0.07
SMG6-215ENST00000574501 CAPSQ13938 189 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 SLC36A3Q495N2 470 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 XKR3Q5GH77 459 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 ZNF667Q5HYK9 610 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 PERM1Q5SV97 790 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 STRIP1Q5VSL9 837 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 FAM117BQ6P1L5 589 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 ERMP1Q7Z2K6 904 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 CAMK1DQ8IU85 385 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 SNX29P2Q8IUI4 249 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 SPATA6LQ8N4H0 392 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 TMEM151AQ8N4L1 468 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 TMCO5AQ8N6Q1 288 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 OR52K1Q8NGK4 314 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 HPS1Q92902 700 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 SPATA13Q96N96 652 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 OMDQ99983 421 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 ATAD3AQ9NVI7 634 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 RIC8BQ9NVN3 520 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 GPRC5DQ9NZD1 345 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 VTI1BQ9UEU0 232 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 VPS51Q9UID3 782 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 GIT1Q9Y2X7 761 aa14.6□□□□□ -0.07
SMG6-215ENST00000574501 BTAF1O14981 1849 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 RGS20O76081 388 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 BCL10O95999 233 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 NR3C2P08235 984 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 CYP3A5P20815 502 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 ARL2P36404 184 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 EN1Q05925 392 aaPredicted RBP14.59□□□□□ -0.07
SMG6-215ENST00000574501 FSTL1Q12841 308 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 BAATQ14032 418 aaPredicted RBP14.59□□□□□ -0.07
SMG6-215ENST00000574501 TBCELQ5QJ74 424 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 THOC7Q6I9Y2 204 aaKnown RBP14.59□□□□□ -0.07
SMG6-215ENST00000574501 ABHD15Q6UXT9 468 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 ZYG11AQ6WRX3 759 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 TOP1MTQ969P6 601 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 ISL2Q96A47 359 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 FAM49BQ9NUQ9 324 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 CD300AQ9UGN4 299 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 ADAM28Q9UKQ2 775 aa14.59□□□□□ -0.07
SMG6-215ENST00000574501 CCDC78A2IDD5 438 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 SDHDO14521 159 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 B4GAT1O43505 415 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 TNNC2P02585 160 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 PABPC1P11940 636 aaKnown RBP14.58□□□□□ -0.07
SMG6-215ENST00000574501 SDC4P31431 198 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 TTKP33981 857 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 PSMD8P48556 350 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 SLC7A2P52569 658 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 Q3C1V9 767 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.07
SMG6-215ENST00000574501 VSIG10LQ86VR7 867 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 ZNF354CQ86Y25 554 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 SCUBE3Q8IX30 993 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 CADM3Q8N126 398 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 MFSD2AQ8NA29 543 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 BPIFB6Q8NFQ5 453 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 MFSD3Q96ES6 412 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 ZNF668Q96K58 619 aaPredicted RBP14.58□□□□□ -0.07
SMG6-215ENST00000574501 IL22Q9GZX6 179 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 UPF3AQ9H1J1 476 aaKnown RBP14.58□□□□□ -0.07
SMG6-215ENST00000574501 NANOGQ9H9S0 305 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms