RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 DSG4Q86SJ6 1040 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 PRPF39Q86UA1 669 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 CCDC170Q8IYT3 715 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 OXR1Q8N573 874 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 C3orf20Q8ND61 904 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 TSC1Q92574 1164 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 RNF34Q969K3 372 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 NXPE2Q96DL1 559 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 CRELD1Q96HD1 420 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 RPRD1AQ96P16 312 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 LUC7LQ9NQ29 371 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 PARVAQ9NVD7 372 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC25A13Q9UJS0 675 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 SIGLEC16A6NMB1 481 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 ATP9BO43861 1147 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 DESP17661 470 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 GSCP56915 257 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 CNTN1Q12860 1018 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 AUHQ13825 339 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 C6orf118Q5T5N4 469 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 AGBL4Q5VU57 503 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 FAM46CQ5VWP2 391 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 KANSL1Q7Z3B3 1105 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 IQCHQ86VS3 1027 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 TRIM69Q86WT6 500 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 DCBLD2Q96PD2 775 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 PPP1R9BQ96SB3 815 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 FEM1AQ9BSK4 669 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 RRN3Q9NYV6 651 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 VANGL2Q9ULK5 521 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 PPM1HQ9ULR3 514 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 DMTF1Q9Y222 760 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 OR51B4Q9Y5P0 310 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 SCINQ9Y6U3 715 aa15.15■□□□□ 0.02
NPLOC4-207ENST00000572346 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 SOWAHDA6NJG2 315 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 MCF2LO15068 1137 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 ALOX15BO15296 676 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 MAGEC1O60732 1142 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 GJB6O95452 261 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 SDC4P31431 198 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 NUDT1P36639 197 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 GGCXP38435 758 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 MAGEA1P43355 309 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 SULT1E1P49888 294 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 OVGP1Q12889 678 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 TARDBPQ13148 414 aaKnown RBP eCLIP15.14■□□□□ 0.011e-7■■■■□ 20.6
NPLOC4-207ENST00000572346 ZNF177Q13360 481 aaPredicted RBP15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 DLG2Q15700 870 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 POM121L1PQ3SYA9 428 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 HES3Q5TGS1 186 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 FBXL19Q6PCT2 694 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 Q6ZVU0 165 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 EMC1Q8N766 993 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 PIP4K2CQ8TBX8 421 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 RXFP2Q8WXD0 754 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 MCEEQ96PE7 176 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 TMEM59LQ9UK28 342 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 VPS28Q9UK41 221 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 HS3ST4Q9Y661 456 aa15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
NPLOC4-207ENST00000572346 C1QTNF3-AMACRE9PGA6 284 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 M0QYT0 321 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 GPD1P21695 349 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 FECHP22830 423 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 FLT3P36888 993 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 ABCG1P45844 678 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 NME3Q13232 169 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 MTA1Q13330 715 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 ILKQ13418 452 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 STAT4Q14765 748 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 C5orf22Q49AR2 442 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 PLEKHA7Q6IQ23 1121 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 ARCQ7LC44 396 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 C14orf80Q86SX3 495 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 SH2D3CQ8N5H7 860 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 CCDC112Q8NEF3 446 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 JOSD2Q8TAC2 188 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 THAP2Q9H0W7 228 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 NENFQ9UMX5 172 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 CA5BQ9Y2D0 317 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 TBC1D30Q9Y2I9 924 aa15.13■□□□□ 0.01
NPLOC4-207ENST00000572346 EIF3CLB5ME19 914 aaKnown RBP15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 PRAMEF26H0Y7S4 382 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 TLX3O43711 291 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 BNIP3LO60238 219 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 SDC3O75056 442 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 PAGE1O75459 146 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 CLDN11O75508 207 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 NDUFA10O95299 355 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 SRCP12931 536 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 CKMT2P17540 419 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 RFC1P35251 1148 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 CDH4P55283 916 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 TAS2R38P59533 333 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 SEMG2Q02383 582 aa15.12■□□□□ 0.01
NPLOC4-207ENST00000572346 DEUP1Q05D60 604 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms