RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SLC27A1Q6PCB7 646 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 OTOP3Q7RTS5 596 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 OSTM1Q86WC4 334 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 CEP97Q8IW35 865 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 CELF6Q96J87 481 aaKnown RBP17.71■□□□□ 0.43
SCARF1-205ENST00000571272 C16orf70Q9BSU1 422 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 FTHL17Q9BXU8 183 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 DUSP16Q9BY84 665 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 RHOJQ9H4E5 214 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 VTI1BQ9UEU0 232 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 TMCO1Q9UM00 188 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 DERAQ9Y315 318 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 NEMP2A6NFY4 417 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 TADA2AO75478 443 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 TMCC1O94876 653 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 SLC12A1Q13621 1099 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 GRIK4Q16099 956 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 FAM219BQ5XKK7 198 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 PDZD4Q76G19 769 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-205ENST00000571272 KDM1BQ8NB78 822 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 DLG3Q92796 817 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 GALNT8Q9NY28 637 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 GTSE1Q9NYZ3 720 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 PAPPA2Q9BXP8 1791 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 MAGEB16A2A368 324 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 C7orf72A4D263 438 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 NPY2RP49146 381 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 TKTL1P51854 596 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 MAP3K7CLP57077 242 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 TMEM126BQ8IUX1 230 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 RDH11Q8TC12 318 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 PHF12Q96QT6 1004 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 OSMRQ99650 979 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 DMTF1Q9Y222 760 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 ACOT9Q9Y305 439 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 BPTFQ12830 3046 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 PLXNA1Q9UIW2 1896 aa17.7■□□□□ 0.42
SCARF1-205ENST00000571272 PIRO00625 290 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 PGK1P00558 417 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 PENKP01210 267 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 FYNP06241 537 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 ZNF26P17031 533 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 PSMC3P17980 439 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 RALGDSQ12967 914 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 POU6F1Q14863 301 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 RPS27LQ71UM5 84 aaKnown RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 SPATA22Q8NHS9 363 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 LRTOMTQ8WZ04 291 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 MED10Q9BTT4 135 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 COQ10BQ9H8M1 238 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 UBQLN1Q9UMX0 589 aaKnown RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 ANKRD6Q9Y2G4 727 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 MRPL42Q9Y6G3 142 aaKnown RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 SMIM28A0A1B0GU29 152 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 YJEFN3A6XGL0 299 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 HUS1O60921 280 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 NPR3P17342 541 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 ADCYAP1R1P41586 468 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 BAG6P46379 1132 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 PSME3P61289 254 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 SOX4Q06945 474 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 APOFQ13790 326 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 TMEM259Q4ZIN3 620 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 TSTD2Q5T7W7 516 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 ZNF280DQ6N043 979 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 MFSD6LQ8IWD5 586 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 GRIN3AQ8TCU5 1115 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 PLK2Q9NYY3 685 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 TARM1B6A8C7 271 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 E7ENX8 843 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 SLCO1B7G3V0H7 640 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 SLC22A2O15244 555 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 IGFBP6P24592 240 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 SLC5A2P31639 672 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 CDH17Q12864 832 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 PDAP1Q13442 181 aaKnown RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 HERC3Q15034 1050 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 CYP2R1Q6VVX0 501 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 PAQR9Q6ZVX9 377 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 BNIPLQ7Z465 357 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 CNTD1Q8N815 330 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 TNIP3Q96KP6 325 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 ULBP1Q9BZM6 244 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 WDR6Q9NNW5 1121 aaKnown RBP17.69■□□□□ 0.42
SCARF1-205ENST00000571272 EPS15L1Q9UBC2 864 aa17.69■□□□□ 0.42
SCARF1-205ENST00000571272 ERI2A8K979 691 aaKnown RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TRIM38O00635 465 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 SDHDO14521 159 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 ITPRIPL1Q6GPH6 555 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 LAYNQ6UX15 382 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 MOB2Q70IA6 237 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 ZNF512Q96ME7 567 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TRPV6Q9H1D0 765 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 CYP4F12Q9HCS2 524 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TRPC7Q9HCX4 862 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 DDIT4Q9NX09 232 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 RNF11Q9Y3C5 154 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms