RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 KIF19Q2TAC6 998 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 ATP13A4Q4VNC1 1196 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 FSCBQ5H9T9 825 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 ADAT2Q7Z6V5 191 aaKnown RBP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 FAM124AQ86V42 546 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 TMPRSS6Q8IU80 811 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 TXLNBQ8N3L3 684 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 NIPA2Q8N8Q9 360 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 TBC1D31Q96DN5 1066 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 KCTD15Q96SI1 283 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 CIPCQ9C0C6 399 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 ZYG11BQ9C0D3 744 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 MKRN2Q9H000 416 aaKnown RBP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 OSBPL2Q9H1P3 480 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 SNX11Q9Y5W9 270 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 A0A1B0GVM2 712 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 TCAF2A6NFQ2 919 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 EEF2KO00418 725 aaKnown RBP13.62□□□□□ -0.23
CCDC40-205ENST00000571028 SPOPO43791 374 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 MTA2O94776 668 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 MOCS3O95396 460 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 RHOCP08134 193 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 PABPC1P11940 636 aaKnown RBP13.62□□□□□ -0.23
CCDC40-205ENST00000571028 EPHB2P29323 1055 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 HLA-FP30511 346 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 ARHGAP25P42331 645 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 CDH4P55283 916 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 TPI1P60174 286 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 CCDC173Q0VFZ6 552 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 PTPRNQ16849 979 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
CCDC40-205ENST00000571028 MPP7Q5T2T1 576 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 CHST9Q7L1S5 443 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 ANKS1BQ7Z6G8 1248 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 DAAM2Q86T65 1068 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 ZNF683Q8IZ20 524 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 SORCS1Q8WY21 1168 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 EPAS1Q99814 870 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 SLC2A11Q9BYW1 496 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 PCED1AQ9H1Q7 454 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 DNAI1Q9UI46 699 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 LCMT1Q9UIC8 334 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 GGA2Q9UJY4 613 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 FBXO10Q9UK96 956 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 ANKRD6Q9Y2G4 727 aa13.62□□□□□ -0.23
CCDC40-205ENST00000571028 A0A0A6YYK5 440 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-205ENST00000571028 DRGXA6NNA5 263 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 PJA2O43164 708 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 PCDHGA12O60330 932 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 CLDN11O75508 207 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 CCDC175P0C221 793 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 CDK4P11802 303 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 MZF1P28698 734 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-205ENST00000571028 OR1E1P30953 314 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 L1CAMP32004 1257 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 CSKP41240 450 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 AIF1P55008 147 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 CDH6P55285 790 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 IL9RQ01113 521 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 SLC25A11Q02978 314 aaKnown RBP13.61□□□□□ -0.23
CCDC40-205ENST00000571028 BOLA3Q53S33 107 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 TTC39BQ5VTQ0 682 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-205ENST00000571028 RNF219Q5W0B1 726 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-205ENST00000571028 CYP4V2Q6ZWL3 525 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-205ENST00000571028 APCDD1Q8J025 514 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 KCTD6Q8NC69 237 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 OR52K2Q8NGK3 314 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 TPCN2Q8NHX9 752 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 FIBINQ8TAL6 211 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 SPON2Q9BUD6 331 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 IRX2Q9BZI1 471 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-205ENST00000571028 KCNF1Q9H3M0 494 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 LZTFL1Q9NQ48 299 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 ALG6Q9Y672 507 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 PTPRBP23467 1997 aa13.61□□□□□ -0.23
CCDC40-205ENST00000571028 TLX3O43711 291 aaPredicted RBP13.6□□□□□ -0.23
CCDC40-205ENST00000571028 KRT1P04264 644 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 GOT1P17174 413 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 POLR2EP19388 210 aaKnown RBP13.6□□□□□ -0.23
CCDC40-205ENST00000571028 MAN1A1P33908 653 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 ARL4AP40617 200 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 IL12RB1P42701 662 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 GRIA4P48058 902 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 C21orf59P57076 290 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 CXADRP78310 365 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 TCEAL1Q15170 157 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 ODF2Q5BJF6 829 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 ACBD5Q5T8D3 534 aaPredicted RBP13.6□□□□□ -0.23
CCDC40-205ENST00000571028 MBLAC2Q68D91 279 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 NETO2Q8NC67 525 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 CYB5D2Q8WUJ1 264 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 CALN1Q9BXU9 219 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 MUC3BQ9H195 1237 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 TM9SF3Q9HD45 589 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 PPARGC1AQ9UBK2 798 aaKnown RBP13.6□□□□□ -0.23
CCDC40-205ENST00000571028 SLC27A6Q9Y2P4 619 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms