RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MUC3BQ9H195 1237 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SLC24A2Q9UI40 661 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ARHGAP26Q9UNA1 814 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 H0Y626 953 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 CBX4O00257 560 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 HNRNPA1P09651 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 CEBPBP17676 345 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 PGAM1P18669 254 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 PRKCHP24723 683 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 OXCT1P55809 520 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 TTC39BQ5VTQ0 682 aaPredicted RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 NAPEPLDQ6IQ20 393 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 ZNF771Q7L3S4 317 aaPredicted RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 SETD3Q86TU7 594 aaPredicted RBP11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 CTAGE3PQ8IX95 158 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 PPM1NQ8N819 430 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 PRKD2Q9BZL6 878 aa11.11□□□□□ -0.63
PDXDC1-216ENST00000569715 XYLBO75191 536 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 LUC7L3O95232 432 aaKnown RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 AVPR1AP37288 418 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 RGRP47804 291 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 GEMP55040 296 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 WNT3AP56704 352 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 CBX2Q14781 532 aaPredicted RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 LINGO4Q6UY18 593 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 RIBC1Q8N443 379 aaPredicted RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 NSMCE1Q8WV22 266 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 EXOC2Q96KP1 924 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 NSMCE3Q96MG7 304 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ACE2Q9BYF1 805 aaPredicted RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 STMN4Q9H169 189 aaPredicted RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 A0A1W2PPM1 405 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 KDELR3O43731 214 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 F7P08709 466 aaPredicted RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 CSKP41240 450 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 MSH2P43246 934 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ARF5P84085 180 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 TNK2Q07912 1038 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 CDH17Q12864 832 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ZNF235Q14590 738 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 TMC5Q6UXY8 1006 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 MICALCLQ6ZW33 695 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 TRABD2AQ86V40 505 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 DDI1Q8WTU0 396 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 SLC44A1Q8WWI5 657 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ZNF778Q96MU6 729 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 SEMA3CQ99985 751 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 GDF15Q99988 308 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 FSD1LQ9BXM9 530 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 RETREG1Q9H6L5 497 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 TASP1Q9H6P5 420 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 TLE6Q9H808 572 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 MOCS1Q9NZB8 636 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 BFARQ9NZS9 450 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 FETUBQ9UGM5 382 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 CDH22Q9UJ99 828 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 RPS6KL1Q9Y6S9 549 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 FAM159BA6NKW6 160 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 CDH18Q13634 790 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 PDE12Q6L8Q7 609 aaKnown RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 RTL10Q7L3V2 364 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 SLC25A41Q8N5S1 370 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ITFG1Q8TB96 612 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 MZB1Q8WU39 189 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ZNF669Q96BR6 464 aaPredicted RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 MFSD3Q96ES6 412 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 CAPS2Q9BXY5 557 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 CHRAC1Q9NRG0 131 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 ZDHHC7Q9NXF8 308 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 SAMD15Q9P1V8 674 aa11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
PDXDC1-216ENST00000569715 UNC80Q8N2C7 3258 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 ANKRD36A6QL64 1941 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 CD160O95971 181 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 GNGT1P63211 74 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 MPP2Q14168 576 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 POU6F1Q14863 301 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 OR51B4Q9Y5P0 310 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 EYSQ5T1H1 3165 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 KRT15P19012 456 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 MPP3Q13368 585 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 RANBP10Q6VN20 620 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 LINC00523Q86TU6 105 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 MFN1Q8IWA4 741 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 C4orf33Q8N1A6 199 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 FEM1AQ9BSK4 669 aa11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 PPANQ9NQ55 473 aaKnown RBP11.09□□□□□ -0.63
PDXDC1-216ENST00000569715 TYW5A2RUC4 315 aaKnown RBP11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 PSMD3O43242 534 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 SHOX2O60902 331 aaPredicted RBP11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 ZMPSTE24O75844 475 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 ALDH1A2O94788 518 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 GSTA2P09210 222 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 ERVK-10P10266 1014 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 CHN1P15882 459 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 NMBRP28336 390 aa11.08□□□□□ -0.63
PDXDC1-216ENST00000569715 MDH1P40925 334 aaKnown RBP11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms