RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SLC12A9Q9BXP2 914 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 CPEB1Q9BZB8 566 aaKnown RBP8.86□□□□□ -0.99
SMG1-216ENST00000569122 FOXP3Q9BZS1 431 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 BLZF1Q9H2G9 400 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 MMRN2Q9H8L6 949 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 IL36AQ9UHA7 158 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 KLF15Q9UIH9 416 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 RELNP78509 3460 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 TMEM110-MUSTN1A8MSY1 372 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 O00370 1275 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 NEMP1O14524 444 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CUTAO60888 179 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 VPS4BO75351 444 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 GCATO75600 419 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 AGFG2O95081 481 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 MYL1P05976 194 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CTSLP07711 333 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 TRIM49P0CI25 452 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 TRIM49CP0CI26 452 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 ADRB3P13945 408 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CTSEP14091 401 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 HGFP14210 728 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 TBXAS1P24557 533 aaPredicted RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 MXI1P50539 228 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 MAPK10P53779 464 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CCL7P80098 99 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 ZFP36L1Q07352 338 aaKnown RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 KLRB1Q12918 225 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 STK4Q13043 487 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 EIF2B5Q13144 721 aaKnown RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 SRSF6Q13247 344 aaKnown RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 CUL2Q13617 745 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CNGA2Q16280 664 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CLPPQ16740 277 aaPredicted RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 ZC3H12AQ5D1E8 599 aaKnown RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 ARSIQ5FYB1 569 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CXorf57Q6NSI4 855 aaKnown RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 PMF1Q6P1K2 205 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 IL22RA1Q8N6P7 574 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 LINC00301Q8NCQ3 95 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CCDC112Q8NEF3 446 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 OR2A12Q8NGT7 310 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 ATL2Q8NHH9 583 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CCDC74AQ96AQ1 378 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 MIB2Q96AX9 1013 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 FAM149B1Q96BN6 582 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 PPP1R13BQ96KQ4 1090 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 ZNF396Q96N95 335 aaPredicted RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 RPRD1AQ96P16 312 aaPredicted RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 MED15Q96RN5 788 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 C1QTNF2Q9BXJ5 285 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 MUC3BQ9H195 1237 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
SMG1-216ENST00000569122 APPL1Q9UKG1 709 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 VPS4AQ9UN37 437 aa8.85□□□□□ -0.99
SMG1-216ENST00000569122 SRCP12931 536 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 GLB1P16278 677 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 TSHRP16473 764 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 ITGB7P26010 798 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 HTR1BP28222 390 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 L1CAMP32004 1257 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 CCR1P32246 355 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 RGS7P49802 495 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 PEX5P50542 639 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 CDH4P55283 916 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
SMG1-216ENST00000569122 MC1RQ01726 317 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 SLC20A2Q08357 652 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 ADAM9Q13443 819 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 C1orf61Q13536 156 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 CUL4BQ13620 913 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 DRAP1Q14919 205 aaPredicted RBP8.84□□□□□ -0.99
SMG1-216ENST00000569122 LACTB2Q53H82 288 aaPredicted RBP8.84□□□□□ -0.99
SMG1-216ENST00000569122 ACBD5Q5T8D3 534 aaPredicted RBP8.84□□□□□ -0.99
SMG1-216ENST00000569122 MACC1Q6ZN28 852 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 TAC4Q86UU9 113 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 CCNJLQ8IV13 435 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 KIAA0895Q8NCT3 520 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 SSC4DQ8WTU2 575 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 APOBEC4Q8WW27 367 aaKnown RBP8.84□□□□□ -0.99
SMG1-216ENST00000569122 ALG14Q96F25 216 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 TAAR9Q96RI9 348 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 KLF6Q99612 283 aaPredicted RBP8.84□□□□□ -0.99
SMG1-216ENST00000569122 LRRC61Q9BV99 259 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 CEP44Q9C0F1 390 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 MIS12Q9H081 205 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 POPDC2Q9HBU9 364 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 TMEM51Q9NW97 253 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 GPR34Q9UPC5 381 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 NAALADL1Q9UQQ1 740 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 PLAAQ9Y263 795 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 TBC1D30Q9Y2I9 924 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 FADS3Q9Y5Q0 445 aa8.84□□□□□ -0.99
SMG1-216ENST00000569122 NBPF19A0A087WUL8 3843 aa8.83□□□□□ -1
SMG1-216ENST00000569122 A0A1W2PQM1 296 aa8.83□□□□□ -1
SMG1-216ENST00000569122 IGLON5A6NGN9 336 aa8.83□□□□□ -1
SMG1-216ENST00000569122 C9orf172C9J069 976 aa8.83□□□□□ -1
SMG1-216ENST00000569122 M0QYV0 167 aa8.83□□□□□ -1
SMG1-216ENST00000569122 HGSO14964 777 aaPredicted RBP8.83□□□□□ -1
SMG1-216ENST00000569122 RAD51BO15315 384 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms