RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 CUL5Q93034 780 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 FRG2BQ96QU4 278 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 ACTR5Q9H9F9 607 aaPredicted RBP4.78□□□□□ -1.64
CHD9-215ENST00000565442 WWOXQ9NZC7 414 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 IL1RAPL1Q9NZN1 696 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 KIR2DS5A0A0G2JLQ3 304 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 C17orf113A0A1B0GUU1 675 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 A0A1W2PPH5 198 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 GAGE10A6NGK3 116 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 FOXO6A8MYZ6 492 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 F8W810 466 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 KIR2DS3K7RE56 304 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 IL1AP01583 271 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 CCKARP32238 428 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 MMP13P45452 471 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 HARS2P49590 506 aaKnown RBP4.77□□□□□ -1.65
CHD9-215ENST00000565442 CCR9P51686 369 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 EFNB1P98172 346 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ID2Q02363 134 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 KRT32Q14532 448 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 SYTL3Q4VX76 610 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ALG10Q5BKT4 473 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ALG10BQ5I7T1 473 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ENTPD8Q5MY95 495 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 CCDC30Q5VVM6 783 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ISM2Q6H9L7 571 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 HMBOX1Q6NT76 420 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 C17orf99Q6UX52 265 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 DSTYKQ6XUX3 929 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 IGFN1Q86VF2 1251 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 WDR5BQ86VZ2 330 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 CPXM2Q8N436 756 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 SMRP1Q8NCR6 262 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 TDRD7Q8NHU6 1098 aaKnown RBP4.77□□□□□ -1.65
CHD9-215ENST00000565442 TEFMQ96QE5 360 aaKnown RBP4.77□□□□□ -1.65
CHD9-215ENST00000565442 TUBB6Q9BUF5 446 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 HEMGNQ9BXL5 484 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 PRSS22Q9GZN4 317 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 EBF3Q9H4W6 596 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ENTPD7Q9NQZ7 604 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ATP8A2Q9NTI2 1148 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 OLA1Q9NTK5 396 aaKnown RBP4.77□□□□□ -1.65
CHD9-215ENST00000565442 PPP1R14DQ9NXH3 145 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 GRHL1Q9NZI5 618 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 HCN3Q9P1Z3 774 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 ORC3Q9UBD5 711 aaPredicted RBP4.77□□□□□ -1.65
CHD9-215ENST00000565442 CDH22Q9UJ99 828 aa4.77□□□□□ -1.65
CHD9-215ENST00000565442 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 TRBV5-3A0A0A0MS03 114 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 TRBV5-7A0A0A0MS05 114 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 PABPN1LA6NDY0 278 aaKnown RBP4.76□□□□□ -1.65
CHD9-215ENST00000565442 DDTLA6NHG4 134 aaPredicted RBP4.76□□□□□ -1.65
CHD9-215ENST00000565442 TMCC1O94876 653 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 SERPINC1P01008 464 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 CAPN3P20807 821 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 MAN1A1P33908 653 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 RXRGP48443 463 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 PLCD1P51178 756 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 MST1RQ04912 1400 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 PTP4A2Q12974 167 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 RPE65Q16518 533 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 ME3Q16798 604 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 SMTNL2Q2TAL5 461 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 TTC39AQ5SRH9 613 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 HAUS3Q68CZ6 603 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 AAGABQ6PD74 315 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 IL20RBQ6UXL0 311 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 ATF7IPQ6VMQ6 1270 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 MOB3CQ70IA8 216 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 TRIM74Q86UV6 250 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 TRIM73Q86UV7 250 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 NFKBIDQ8NI38 313 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 NOC3LQ8WTT2 800 aaKnown RBP4.76□□□□□ -1.65
CHD9-215ENST00000565442 CLMNQ96JQ2 1002 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 C7orf26Q96N11 449 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 PCDHB16Q9NRJ7 776 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 THSD1Q9NS62 852 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 TUBA8Q9NY65 449 aaPredicted RBP4.76□□□□□ -1.65
CHD9-215ENST00000565442 PLEKHB1Q9UF11 243 aaPredicted RBP4.76□□□□□ -1.65
CHD9-215ENST00000565442 AGO2Q9UKV8 859 aaKnown RBP4.76□□□□□ -1.65
CHD9-215ENST00000565442 SARDHQ9UL12 918 aa4.76□□□□□ -1.65
CHD9-215ENST00000565442 TEX13CA0A0J9YWL9 993 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 A0A1W2PPC1 479 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 E5RJQ4 531 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 PRPF4O43172 522 aaKnown RBP eCLIP4.75□□□□□ -1.65
CHD9-215ENST00000565442 TNFSF14O43557 240 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 BAIAP3O94812 1187 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 LCKP06239 509 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 UBL4AP11441 157 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 COX7A2P14406 83 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 EPHA8P29322 1005 aaPredicted RBP4.75□□□□□ -1.65
CHD9-215ENST00000565442 SLC16A2P36021 539 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 ARSFP54793 590 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 GAD2Q05329 585 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 EDRF1Q3B7T1 1238 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 Q4G0T1 1027 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 SLC9B1Q4ZJI4 515 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 GPATCH4Q5T3I0 446 aaKnown RBP4.75□□□□□ -1.65
CHD9-215ENST00000565442 WDR78Q5VTH9 848 aa4.75□□□□□ -1.65
CHD9-215ENST00000565442 TBC1D9BQ66K14 1250 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms