RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 SEMA3BQ13214 749 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 KRT81Q14533 505 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 NUMA1Q14980 2115 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 CA9Q16790 459 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 SMTNL2Q2TAL5 461 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 KCNT1Q5JUK3 1230 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 ARTNQ5T4W7 220 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 IL27RAQ6UWB1 636 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 LEKR1Q6ZMV7 388 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 DPY19L3Q6ZPD9 716 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 PRPF39Q86UA1 669 aaKnown RBP13.92□□□□□ -0.18
CNOT1-206ENST00000564557 UMODL1-AS1Q8N2C9 162 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 ARFGAP1Q8N6T3 406 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 CHST14Q8NCH0 376 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 ARHGEF26Q96DR7 871 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 HMCESQ96FZ2 354 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 BTBD6Q96KE9 485 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 PEBP4Q96S96 227 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 KCTD15Q96SI1 283 aaPredicted RBP13.92□□□□□ -0.18
CNOT1-206ENST00000564557 TM6SF2Q9BZW4 377 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 ZDHHC6Q9H6R6 413 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 CAPN10Q9HC96 672 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 NEU3Q9UQ49 428 aa13.92□□□□□ -0.18
CNOT1-206ENST00000564557 TNRC6BQ9UPQ9 1833 aaKnown RBP13.92□□□□□ -0.18
CNOT1-206ENST00000564557 DFFAO00273 331 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 PLK4O00444 970 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 LEFTY1O75610 366 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 IGSF6O95976 241 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 ERCC2P18074 760 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 HCAR3P49019 387 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 CCR5P51681 352 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 CCNHP51946 323 aaPredicted RBP13.91□□□□□ -0.18
CNOT1-206ENST00000564557 C21orf59P57076 290 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 RHOAP61586 193 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 FOXK2Q01167 660 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 SERINC3Q13530 473 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 INO80DQ53TQ3 878 aaPredicted RBP13.91□□□□□ -0.18
CNOT1-206ENST00000564557 SLC45A4Q5BKX6 768 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 FBXL19Q6PCT2 694 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 PLPP6Q8IY26 295 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 MINDY1Q8N5J2 469 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 LZTR1Q8N653 840 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 NIPA2Q8N8Q9 360 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 CELF6Q96J87 481 aaKnown RBP13.91□□□□□ -0.18
CNOT1-206ENST00000564557 LRIG1Q96JA1 1093 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 CHP1Q99653 195 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 SP110Q9HB58 689 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 FSCN3Q9NQT6 498 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 AASDHPPTQ9NRN7 309 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.91□□□□□ -0.18
CNOT1-206ENST00000564557 UBA2Q9UBT2 640 aaPredicted RBP13.91□□□□□ -0.18
CNOT1-206ENST00000564557 ACTL7AQ9Y615 435 aa13.91□□□□□ -0.18
CNOT1-206ENST00000564557 ZNF292O60281 2723 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 A0A1W2PPC4 97 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 KRIT1O00522 736 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 CDX4O14627 284 aaPredicted RBP13.9□□□□□ -0.18
CNOT1-206ENST00000564557 PLRG1O43660 514 aaKnown RBP13.9□□□□□ -0.18
CNOT1-206ENST00000564557 TMCC1O94876 653 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 PCDH8O95206 1070 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 POP4O95707 220 aaKnown RBP13.9□□□□□ -0.18
CNOT1-206ENST00000564557 CER1O95813 267 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 GSRP00390 522 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 CTSLP07711 333 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 TMEM253P0C7T8 217 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 RARAP10276 462 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 DRD3P35462 400 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 GJC1P36383 396 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 NUDT1P36639 197 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 CSNK1EP49674 416 aaKnown RBP13.9□□□□□ -0.18
CNOT1-206ENST00000564557 DSG2Q14126 1118 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 ERN2Q76MJ5 926 aaKnown RBP13.9□□□□□ -0.18
CNOT1-206ENST00000564557 PAF1Q8N7H5 531 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 OR2AP1Q8NGE2 309 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 TEKT4Q8WW24 435 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 GDAP1L1Q96MZ0 367 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 SLC32A1Q9H598 525 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 TM9SF3Q9HD45 589 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 OSGEPQ9NPF4 335 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
CNOT1-206ENST00000564557 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 CWC15Q9P013 229 aaKnown RBP13.9□□□□□ -0.18
CNOT1-206ENST00000564557 CFAP54Q96N23 3096 aa13.9□□□□□ -0.18
CNOT1-206ENST00000564557 NYNRINQ9P2P1 1898 aaKnown RBP13.89□□□□□ -0.19
CNOT1-206ENST00000564557 NEMP1O14524 444 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 IGHV4-34P06331 123 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 IL1R2P27930 398 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 SERPINB6P35237 376 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 GRIA4P48058 902 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 PAPOLAP51003 745 aaKnown RBP13.89□□□□□ -0.19
CNOT1-206ENST00000564557 NEK3P51956 506 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 METAP1P53582 386 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 CDH6P55285 790 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 RACK1P63244 317 aaKnown RBP13.89□□□□□ -0.19
CNOT1-206ENST00000564557 GRIK2Q13002 908 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 TBX2Q13207 712 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-206ENST00000564557 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
CNOT1-206ENST00000564557 ASTE1Q2TB18 679 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-206ENST00000564557 MYLK3Q32MK0 819 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms