RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 DNTTIP2Q5QJE6 756 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 TMEM240Q5SV17 173 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 LIN9Q5TKA1 542 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 TAF3Q5VWG9 929 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 IGFL4Q6B9Z1 124 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 ACAD10Q6JQN1 1059 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 FSTL4Q6MZW2 842 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 ABHD17CQ6PCB6 329 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 FAM111BQ6SJ93 734 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 RAD9BQ6WBX8 426 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 H2AFVQ71UI9 128 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 FGD2Q7Z6J4 655 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 KIAA0907Q7Z7F0 614 aaPredicted RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 ACOT1Q86TX2 421 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 CEP57Q86XR8 500 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 CMTR2Q8IYT2 770 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 DCP1BQ8IZD4 617 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 ADGRF2Q8IZF7 708 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 CCAR2Q8N163 923 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 CRYBG2Q8N1P7 616 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 SYNPOQ8N3V7 929 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 PDCL2Q8N4E4 241 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 RNF10Q8N5U6 811 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 UBR7Q8N806 425 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 SLC4A11Q8NBS3 891 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 OR5AN1Q8NGI8 311 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 KIAA1524Q8TCG1 905 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 CTNNBL1Q8WYA6 563 aaPredicted RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 HERVK_113Q902F9 699 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 ZNF689Q96CS4 500 aaPredicted RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 CYFIP2Q96F07 1278 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 VCPIP1Q96JH7 1222 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 ZNF558Q96NG5 402 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 RAD9AQ99638 391 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 ACBD6Q9BR61 282 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 MRPL45Q9BRJ2 306 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 PAAF1Q9BRP4 392 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 MED10Q9BTT4 135 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 SDCBP2Q9H190 292 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 CWH43Q9H720 699 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 SMYD3Q9H7B4 428 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 SPTLC3Q9NUV7 552 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 TRMT1Q9NXH9 659 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 DDX43Q9NXZ2 648 aaKnown RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 SAMD15Q9P1V8 674 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 DNAJB4Q9UDY4 337 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 CDH9Q9ULB4 789 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 INTUQ9ULD6 942 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 ZMYND8Q9ULU4 1186 aaPredicted RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 PYCARDQ9ULZ3 195 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 L1RE1Q9UN81 338 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 SSX2IPQ9Y2D8 614 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 STXBP5LQ9Y2K9 1186 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 PRG3Q9Y2Y8 225 aaPredicted RBP4.85□□□□□ -1.63
CDR2-203ENST00000563573 SH3BP1Q9Y3L3 701 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 ATP8B3O60423 1300 aa4.85□□□□□ -1.63
CDR2-203ENST00000563573 SF3B1O75533 1304 aaKnown RBP eCLIP4.85□□□□□ -1.633e-6■■■■■ 137.9
CDR2-203ENST00000563573 PTPRSQ13332 1948 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 NLRC5Q86WI3 1866 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 A0A087X1B8 175 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 NT5C1B-RDH14C9J2C7 533 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 GABRDO14764 452 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 PJA2O43164 708 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 KIF5CO60282 957 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 LPXNO60711 386 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 KRT37O76014 449 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 GJB5O95377 273 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 LSM8O95777 96 aaKnown RBP4.84□□□□□ -1.63
CDR2-203ENST00000563573 CALB1P05937 261 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 MYBL1P10243 752 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 ATP2A2P16615 1042 aaKnown RBP4.84□□□□□ -1.63
CDR2-203ENST00000563573 LMO2P25791 158 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 PPM1AP35813 382 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 BRCC3P46736 316 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 SLC11A1P49279 550 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 AARSP49588 968 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDR2-203ENST00000563573 MAN2A2P49641 1150 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 GATMP50440 423 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 VAV2P52735 878 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 ZNF132P52740 706 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 GALCP54803 685 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 DEFB103AP81534 67 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 SMAD3P84022 425 aaKnown RBP4.84□□□□□ -1.63
CDR2-203ENST00000563573 FMO1Q01740 532 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 SMARCB1Q12824 385 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 MTF1Q14872 753 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 PTPN14Q15678 1187 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 FAM171A1Q5VUB5 890 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 WSCD1Q658N2 575 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 KIAA1841Q6NSI8 718 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 TIGD7Q6NT04 549 aaPredicted RBP4.84□□□□□ -1.63
CDR2-203ENST00000563573 LCLAT1Q6UWP7 414 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 C4orf50Q6ZRC1 276 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 TOGARAM2Q6ZUX3 1019 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 UBE2R2Q712K3 238 aaPredicted RBP4.84□□□□□ -1.63
CDR2-203ENST00000563573 BMP8AQ7Z5Y6 402 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 ERICH1Q86X53 443 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 ANKRD52Q8NB46 1076 aa4.84□□□□□ -1.63
CDR2-203ENST00000563573 PLA2G15Q8NCC3 412 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms