RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TGM2P21980 687 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 GRK5P34947 590 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 SOX2P48431 317 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 BIRC3Q13489 604 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 PUM3Q15397 648 aaKnown RBP5.4□□□□□ -1.54
LINC00254-201ENST00000563416 PDCD2Q16342 344 aaPredicted RBP5.4□□□□□ -1.54
LINC00254-201ENST00000563416 PFKFB4Q16877 469 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 HSP90AB3PQ58FF7 597 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 WDR78Q5VTH9 848 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 CCDC30Q5VVM6 783 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 LIPMQ5VYY2 423 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 TMEM88Q6PEY1 159 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 OR4N4Q8N0Y3 316 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 STYXQ8WUJ0 223 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 ZFPM2Q8WW38 1151 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 EID2BQ96D98 161 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 CRB3Q9BUF7 120 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 KATNAL1Q9BW62 490 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 GATA5Q9BWX5 397 aaPredicted RBP5.4□□□□□ -1.54
LINC00254-201ENST00000563416 SFXN1Q9H9B4 322 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 MLXIPLQ9NP71 852 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 TMEM45AQ9NWC5 275 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 SLC8A2Q9UPR5 921 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 ADCY9O60503 1353 aa5.4□□□□□ -1.55
LINC00254-201ENST00000563416 DUOX1Q9NRD9 1551 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 SCN9AQ15858 1988 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3DA0A087WVF3 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3IA0A087WXS9 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3EA0A087X179 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3KA0A087X1G2 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3BA6NDS4 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3FA6NER0 549 aaPredicted RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 EFCAB8A8MWE9 144 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3LB9A6J9 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 SYT5O00445 386 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 PIP5K1CO60331 668 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3HP0C7X1 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 CHRNA5P30532 468 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 MAN1A1P33908 653 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 NR4A2P43354 598 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 CCT5P48643 541 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 SLC37A1P57057 533 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 SF3A3Q12874 501 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TWIST1Q15672 202 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 GPR162Q16538 588 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 CRY2Q49AN0 593 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 PARP10Q53GL7 1025 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 EPHA10Q5JZY3 1008 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 LRCH2Q5VUJ6 765 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3GQ6DHY5 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3CQ6IPX1 549 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 NBPF5PQ86XG9 351 aaPredicted RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 TBC1D3Q8IZP1 549 aaPredicted RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 NKAPQ8N5F7 415 aaKnown RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 POF1BQ8WVV4 589 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 HMGB4Q8WW32 186 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 MCRS1Q96EZ8 462 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 ZFYVE19Q96K21 471 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 ZNF48Q96MX3 618 aaPredicted RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 RTKNQ9BST9 563 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 ISCA1Q9BUE6 129 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 HTATIP2Q9BUP3 242 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 NYXQ9GZU5 481 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 MOV10Q9HCE1 1003 aaKnown RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 LIN7CQ9NUP9 197 aaKnown RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 HERC5Q9UII4 1024 aaKnown RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 FBXO9Q9UK97 447 aaPredicted RBP5.39□□□□□ -1.55
LINC00254-201ENST00000563416 SLC12A4Q9UP95 1085 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 HS3ST3B1Q9Y662 390 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 DGKBQ9Y6T7 804 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 WDR90Q96KV7 1748 aa5.39□□□□□ -1.55
LINC00254-201ENST00000563416 ARAP2Q8WZ64 1704 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 DPPA5A6NC42 116 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 KIF28PB7ZC32 967 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 H0YIN7 160 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 PRPF4O43172 522 aaKnown RBP eCLIP5.38□□□□□ -1.55
LINC00254-201ENST00000563416 PPP6R2O75170 966 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 CNTN5O94779 1100 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 IGKV2-30P06310 120 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 HSP90AA1P07900 732 aaKnown RBP5.38□□□□□ -1.55
LINC00254-201ENST00000563416 PRF1P14222 555 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 GPTP24298 496 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 ME1P48163 572 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 TAS2R50P59544 299 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 RPL15P61313 204 aaKnown RBP5.38□□□□□ -1.55
LINC00254-201ENST00000563416 B4GALNT1Q00973 533 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 RNASELQ05823 741 aaKnown RBP5.38□□□□□ -1.55
LINC00254-201ENST00000563416 SRSF1Q07955 248 aaKnown RBP eCLIP5.38□□□□□ -1.55
LINC00254-201ENST00000563416 AIMP1Q12904 312 aaKnown RBP5.38□□□□□ -1.55
LINC00254-201ENST00000563416 TRIM60Q495X7 471 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 SLC10A5Q5PT55 438 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 SUSD4Q5VX71 490 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 ZNF474Q6S9Z5 364 aaPredicted RBP5.38□□□□□ -1.55
LINC00254-201ENST00000563416 KLHL17Q6TDP4 642 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 PPP1R42Q7Z4L9 355 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 C2CD5Q86YS7 1000 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 ARFGAP1Q8N6T3 406 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 ATG16L2Q8NAA4 619 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms