RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ALDH3A1P30838 453 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 OR1E1P30953 314 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 ETFBP38117 255 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 KCNJ2P63252 427 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 IRF9Q00978 393 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 SPOUT1Q5T280 376 aaKnown RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 PDPK2PQ6A1A2 396 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 TBC1D1Q86TI0 1168 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 TRIM42Q8IWZ5 723 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 KIF2BQ8N4N8 673 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 TEX26Q8N6G2 289 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 PPHLN1Q8NEY8 458 aaKnown RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 FATE1Q969F0 183 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 VPS39Q96JC1 886 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 TMEM120AQ9BXJ8 343 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 DCDC2Q9UHG0 476 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 DNMT3LQ9UJW3 386 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 HBS1LQ9Y450 684 aaKnown RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 ZNF840PA6NDX5 716 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 KCNA4P22459 653 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 GABRB3P28472 473 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 ATP5C1P36542 298 aaKnown RBP19.38■□□□□ 0.69
SMPD3-203ENST00000563226 ARCN1P48444 511 aaKnown RBP19.38■□□□□ 0.69
SMPD3-203ENST00000563226 TUFMP49411 452 aaKnown RBP19.38■□□□□ 0.69
SMPD3-203ENST00000563226 CSE1LP55060 971 aaKnown RBP19.38■□□□□ 0.69
SMPD3-203ENST00000563226 SERINC3Q13530 473 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 PCLAFQ15004 111 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 ATG16L1Q676U5 607 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 MTDHQ86UE4 582 aaKnown RBP19.38■□□□□ 0.69
SMPD3-203ENST00000563226 C7orf26Q96N11 449 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 PPP1R2P1Q96PQ5 205 aa19.38■□□□□ 0.69
SMPD3-203ENST00000563226 AFF4Q9UHB7 1163 aaKnown RBP19.38■□□□□ 0.69
SMPD3-203ENST00000563226 COCHO43405 550 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 SNNO75324 88 aaPredicted RBP19.37■□□□□ 0.69
SMPD3-203ENST00000563226 VAPBO95292 243 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 FGF3P11487 239 aaPredicted RBP19.37■□□□□ 0.69
SMPD3-203ENST00000563226 ARFIP2P53365 341 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 DEFB103AP81534 67 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 SEPT6Q14141 434 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 GRM3Q14832 879 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 MBLAC2Q68D91 279 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 POTEHQ6S545 545 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 DENND6AQ8IWF6 608 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 OR52K2Q8NGK3 314 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 CRISPLD2Q9H0B8 497 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 ATP13A1Q9HD20 1204 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 DONSONQ9NYP3 566 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 ANAPC1Q9H1A4 1944 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 F5H5T6 163 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 ACSL4O60488 711 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 SOD2P04179 222 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 TARSP26639 723 aaKnown RBP19.37■□□□□ 0.69
SMPD3-203ENST00000563226 MPP1Q00013 466 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 IL10RBQ08334 325 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 CNGA3Q16281 694 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 PARP15Q460N3 678 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 TAF1BQ53T94 588 aaPredicted RBP19.37■□□□□ 0.69
SMPD3-203ENST00000563226 ZC3HC1Q86WB0 502 aaKnown RBP19.37■□□□□ 0.69
SMPD3-203ENST00000563226 CCDC117Q8IWD4 279 aaPredicted RBP19.37■□□□□ 0.69
SMPD3-203ENST00000563226 PRR11Q96HE9 360 aaPredicted RBP19.37■□□□□ 0.69
SMPD3-203ENST00000563226 NACA2Q9H009 215 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 CYP4F11Q9HBI6 524 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 TREX1Q9NSU2 369 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 TMEM39AQ9NV64 488 aa19.37■□□□□ 0.69
SMPD3-203ENST00000563226 A0A096LPK6 155 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 MUSKO15146 869 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 TIMM44O43615 452 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ABLIM3O94929 683 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 UNC5CO95185 931 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 MAPKAPK2P49137 400 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 KPNA1P52294 538 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 CTBP1Q13363 440 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 INSCQ1MX18 579 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 HSF5Q4G112 596 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 SNX30Q5VWJ9 437 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ASRGL1Q7L266 308 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 C10orf107Q8IVU9 208 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ARRDC2Q8TBH0 407 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 RAB3IL1Q8TBN0 382 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 TOP1MTQ969P6 601 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 GKN1Q9NS71 199 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 HEY2Q9UBP5 337 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 MARCOQ9UEW3 520 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 YIPF1Q9Y548 306 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ACTL7AQ9Y615 435 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 A0A0D9SEW6 157 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ITM2AO43736 263 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 LYPLA1O75608 230 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 AHSGP02765 367 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 KLKB1P03952 638 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 C2P06681 752 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 T-ENOLP0DO92 83 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 MYL2P10916 166 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ITGB8P26012 769 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 STX3Q13277 289 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 PLD1Q13393 1074 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 HECTD3Q5T447 861 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 CYB5D1Q6P9G0 228 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ATG14Q6ZNE5 492 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 CLEC14AQ86T13 490 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms