RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 SETMARQ53H47 684 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 SLC45A4Q5BKX6 768 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 SFMBT2Q5VUG0 894 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 DBX2Q6ZNG2 339 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 ZNF571Q7Z3V5 609 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 TMC6Q7Z403 805 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 RAB44Q7Z6P3 723 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 GLRX5Q86SX6 157 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 LUZP1Q86V48 1076 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 ZNF354CQ86Y25 554 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 GATAD2AQ86YP4 633 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 RTL3Q8N8U3 475 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 KLK6Q92876 244 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 GATA6Q92908 595 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 SKA1Q96BD8 255 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 ELF4Q99607 663 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 NOL6Q9H6R4 1146 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 CBX8Q9HC52 389 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 GDF3Q9NR23 364 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 GPATCH2LQ9NWQ4 482 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 FZD10Q9ULW2 581 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 NEUROG3Q9Y4Z2 214 aa17.53■□□□□ 0.4
CDC42BPB-208ENST00000561271 A0A1W2PQU0 124 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 GOLGA8CPA6NN73 597 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 TRIM16O95361 564 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 EPHB2P29323 1055 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 GKP32189 559 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 GRK6P43250 576 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 NXPH1P58417 271 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 SLC20A2Q08357 652 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 MAMLD1Q13495 774 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 SUZ12Q15022 739 aaKnown RBP17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 POLD3Q15054 466 aaPredicted RBP17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 SHBQ15464 509 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 CARD16Q5EG05 197 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 ERN2Q76MJ5 926 aaKnown RBP17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 SLCO6A1Q86UG4 719 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 RYBPQ8N488 228 aaPredicted RBP17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 PPP1R16AQ96I34 528 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 EPAS1Q99814 870 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 HEPHQ9BQS7 1158 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 MAGEH1Q9H213 219 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 FZD3Q9NPG1 666 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 TOR4AQ9NXH8 423 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 DMTF1Q9Y222 760 aa17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 APOBEC2Q9Y235 224 aaKnown RBP17.52■□□□□ 0.4
CDC42BPB-208ENST00000561271 TLR4O00206 839 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 SLC31A1O15431 190 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 DFNA5O60443 496 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 APC2O95996 2303 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PROS1P07225 676 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 ATXN1LP0C7T5 689 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 SKILP12757 684 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 DESP17661 470 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PSMA2P25787 234 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 ITGB7P26010 798 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 NUDT1P36639 197 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PRKCIP41743 596 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 NEK3P51956 506 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 GEMIN4P57678 1058 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 KLHL30Q0D2K2 578 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 NR1I3Q14994 352 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 INAVAQ3KP66 663 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 SEL1L3Q68CR1 1132 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PLEKHA7Q6IQ23 1121 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PPP1R2P3Q6NXS1 205 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PARS2Q7L3T8 475 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 SPATS2Q86XZ4 545 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 MFSD2AQ8NA29 543 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 NETO2Q8NC67 525 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 ADAMTS14Q8WXS8 1223 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 ZNF653Q96CK0 615 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 VCPIP1Q96JH7 1222 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 CDC6Q99741 560 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 HDAC8Q9BY41 377 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 TRIM7Q9C029 511 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 RETREG1Q9H6L5 497 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PARVAQ9NVD7 372 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 AIPL1Q9NZN9 384 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 HECAQ9UBI9 543 aaPredicted RBP17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 HPCAL4Q9UM19 191 aa17.51■□□□□ 0.39
CDC42BPB-208ENST00000561271 PKD1L2Q7Z442 2459 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 DDX3XO00571 662 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 KRT37O76014 449 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 PCDH8O95206 1070 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 ADRB3P13945 408 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 EPHA8P29322 1005 aaPredicted RBP17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 AIF1P55008 147 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 TPI1P60174 286 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 CCDC15Q0P6D6 951 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 ZNF284Q2VY69 593 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 ATXN7L2Q5T6C5 722 aaPredicted RBP17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 HORMAD1Q86X24 394 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 TMEM145Q8NBT3 493 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 ISG20Q96AZ6 181 aaKnown RBP17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 HMCESQ96FZ2 354 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 PEBP4Q96S96 227 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 AP4E1Q9UPM8 1137 aa17.5■□□□□ 0.39
CDC42BPB-208ENST00000561271 ZFR2Q9UPR6 939 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms