RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PDZD3Q86UT5 571 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 VPS36Q86VN1 386 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 EID2Q8N6I1 236 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 TSC1Q92574 1164 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 NT5C3BQ969T7 300 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 PPP1R16AQ96I34 528 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 EIF3CQ99613 913 aaKnown RBP13.88□□□□□ -0.19
SMAD3-214ENST00000560402 TUBB2BQ9BVA1 445 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 TKTL2Q9H0I9 626 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 SIK2Q9H0K1 926 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 PDCL3Q9H2J4 239 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 HAUS4Q9H6D7 363 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 DYRK4Q9NR20 520 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 DNAI1Q9UI46 699 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 AJAP1Q9UKB5 411 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-214ENST00000560402 BZW2Q9Y6E2 419 aaKnown RBP13.88□□□□□ -0.19
SMAD3-214ENST00000560402 MYLKQ15746 1914 aa13.88□□□□□ -0.19
SMAD3-214ENST00000560402 CHD5Q8TDI0 1954 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 URB1O60287 2271 aaKnown RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 IGLV3-10A0A075B6K4 115 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 A0A087WV48 116 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 SSU72P8A0A1W2PR75 194 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 FOXN3O00409 490 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 SERPING1P05155 500 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 MAT2AP31153 395 aaKnown RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 NUMBP49757 651 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 KLK7P49862 253 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 CYP4F3Q08477 520 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 ACAP1Q15027 740 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 ASIC2Q16515 512 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 TDRD12Q587J7 1177 aaKnown RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 PIP5KL1Q5T9C9 394 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 C22orf39Q6P5X5 142 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 KANSL1Q7Z3B3 1105 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 C14orf80Q86SX3 495 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 SPATS2Q86XZ4 545 aaKnown RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 ZNF683Q8IZ20 524 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 CACTIN-AS1Q8N1I8 211 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 ATP11CQ8NB49 1132 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 TMEM145Q8NBT3 493 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 TMIEQ8NEW7 156 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 FAM174AQ8TBP5 190 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 C18orf8Q96DM3 657 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 C1orf74Q96LT6 269 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 PSMB7Q99436 277 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-214ENST00000560402 VPS51Q9UID3 782 aa13.87□□□□□ -0.19
SMAD3-214ENST00000560402 CXorf51AA0A1B0GTR3 108 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 LRRC53A6NM62 1247 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 DRGXA6NNA5 263 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 PLK4O00444 970 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
SMAD3-214ENST00000560402 BNIP3LO60238 219 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 CNTN5O94779 1100 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 JUPP14923 745 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 CYP11B1P15538 503 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 AKT2P31751 481 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 CHRNA3P32297 505 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 RECQLP46063 649 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-214ENST00000560402 DNAJC3Q13217 504 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 RAPGEF1Q13905 1077 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-214ENST00000560402 ALFQ53S48 1182 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 PRAMEF14Q5SWL7 426 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 FBXL19Q6PCT2 694 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 C19orf48Q6RUI8 117 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 ZNF662Q6ZS27 426 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 ARCQ7LC44 396 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 OR2A12Q8NGT7 310 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 HAPLN3Q96S86 360 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 TBCBQ99426 244 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 CEP44Q9C0F1 390 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
SMAD3-214ENST00000560402 TRPM6Q9BX84 2022 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 CELSR3Q9NYQ7 3312 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 ILVBLA1L0T0 632 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 CBX4O00257 560 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 KPNA3O00505 521 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-214ENST00000560402 SNAP91O60641 907 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 CTSLP07711 333 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 PNMA6AP0CW24 399 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-214ENST00000560402 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-214ENST00000560402 CKMT2P17540 419 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 HNRNPA2B1P22626 353 aaKnown RBP13.85□□□□□ -0.19
SMAD3-214ENST00000560402 ACP1P24666 158 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 OR1E1P30953 314 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 ETFBP38117 255 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 TAS2R38P59533 333 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 SLC20A2Q08357 652 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 KCNMA1Q12791 1236 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 KIF5AQ12840 1032 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 BNIP3Q12983 259 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 COL9A2Q14055 689 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-214ENST00000560402 POM121L1PQ3SYA9 428 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 HES3Q5TGS1 186 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 RETSATQ6NUM9 610 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms