RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CDX4O14627 284 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 RASA4O43374 803 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SMAD6O43541 496 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 PLRG1O43660 514 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 KDELR3O43731 214 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 MAGEC1O60732 1142 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 MFAP3LO75121 409 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 LEFTY1O75610 366 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 PALMO75781 387 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ZMPSTE24O75844 475 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 PCDH8O95206 1070 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 GSRP00390 522 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 KRT7P08729 469 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ERCC2P18074 760 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 XPAP23025 273 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 GLDCP23378 1020 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 NFKBIAP25963 317 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 DRD3P35462 400 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ACVRL1P37023 503 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 EIF4A3P38919 411 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 ARHGAP25P42331 645 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SLC1A1P43005 524 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 GRIA4P48058 902 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ARRB1P49407 418 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 RENBPP51606 427 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 CCR5P51681 352 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 CCNHP51946 323 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 NEK3P51956 506 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ADPRHP54922 357 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 RHOAP61586 193 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 RACK1P63244 317 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 ARF5P84085 180 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 FOXK1P85037 733 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 OVGP1Q12889 678 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SEMA3BQ13214 749 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SGCGQ13326 291 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SERINC3Q13530 473 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 HNRNPDQ14103 355 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 DSG2Q14126 1118 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 KRT81Q14533 505 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 RFTN1Q14699 578 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 STAT4Q14765 748 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SUZ12Q15022 739 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 PDK2Q15119 407 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SPA17Q15506 151 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 DPYSL2Q16555 572 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SMTNL2Q2TAL5 461 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 POM121L1PQ3SYA9 428 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SETMARQ53H47 684 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 ZNF805Q5CZA5 627 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 CARD16Q5EG05 197 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ARSIQ5FYB1 569 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 KCNT1Q5JUK3 1230 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 TMCO4Q5TGY1 634 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 TMCO3Q6UWJ1 677 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ERN2Q76MJ5 926 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 ZSCAN30Q86W11 494 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 DNAAF5Q86Y56 855 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 LRRC49Q8IUZ0 686 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 CCDC170Q8IYT3 715 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 BBS5Q8N3I7 341 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ZCCHC9Q8N567 271 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 MINDY1Q8N5J2 469 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 AADATQ8N5Z0 425 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 PAF1Q8N7H5 531 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 KCTD6Q8NC69 237 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ZNF564Q8TBZ8 553 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 GRIN3AQ8TCU5 1115 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 TEKT4Q8WW24 435 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 RAB7BQ96AH8 199 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 HMCESQ96FZ2 354 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 FEM1CQ96JP0 617 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SERAC1Q96JX3 654 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 GDAP1L1Q96MZ0 367 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SNRNP25Q9BV90 132 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 HDAC8Q9BY41 377 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 TM6SF2Q9BZW4 377 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 C6orf106Q9H6K1 298 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 ZDHHC6Q9H6R6 413 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SP110Q9HB58 689 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 CAPN10Q9HC96 672 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 OSGEPQ9NPF4 335 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 RXFP3Q9NSD7 469 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 NDFIP2Q9NV92 336 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 RCOR3Q9P2K3 495 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 UBA2Q9UBT2 640 aaPredicted RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 ZNF212Q9UDV6 495 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SERGEFQ9UGK8 458 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 INTUQ9ULD6 942 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 DMTF1Q9Y222 760 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 FCF1Q9Y324 198 aaKnown RBP4.45□□□□□ -1.7
SNX1-205ENST00000559339 PCDHB9Q9Y5E1 797 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 DNAH14Q0VDD8 3507 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 CEP250Q9BV73 2442 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 ABCA7Q8IZY2 2146 aa4.45□□□□□ -1.7
SNX1-205ENST00000559339 SPTBN4Q9H254 2564 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 PRAMEF26H0Y7S4 382 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 VILLO15195 856 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 YKT6O15498 198 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 LATO43561 262 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms