RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 HTR3CQ8WXA8 447 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 SPOCK2Q92563 424 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 TEKT5Q96M29 485 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 VAT1Q99536 393 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 FAM118BQ9BPY3 351 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 L2HGDHQ9H9P8 463 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 SP110Q9HB58 689 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 PLA2G4CQ9UP65 541 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 USP34Q70CQ2 3546 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 CFAP69A5D8W1 941 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 PI15O43692 258 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 PHF2O75151 1096 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 STIP1P31948 543 aaKnown RBP15.05■□□□□ -0
SNRPA1-207ENST00000559309 CD68P34810 354 aaPredicted RBP15.05■□□□□ -0
SNRPA1-207ENST00000559309 HSPA9P38646 679 aaKnown RBP15.05■□□□□ -0
SNRPA1-207ENST00000559309 FNTAP49354 379 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 NUMBP49757 651 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 RENBPP51606 427 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 GDF10P55107 478 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 UBXN2BQ14CS0 331 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 RALGPS1Q5JS13 557 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 SYT13Q7L8C5 426 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 ADAT2Q7Z6V5 191 aaKnown RBP15.05■□□□□ -0
SNRPA1-207ENST00000559309 ALLCQ8N6M5 410 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 ATP11CQ8NB49 1132 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 TSEN2Q8NCE0 465 aaKnown RBP15.05■□□□□ -0
SNRPA1-207ENST00000559309 ARRDC2Q8TBH0 407 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 FAM131CQ96AQ9 280 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 FAM129BQ96TA1 746 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 PRSS16Q9NQE7 514 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 CACNA2D2Q9NY47 1150 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 SEPT3Q9UH03 358 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 PCYOX1Q9UHG3 505 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 FCF1Q9Y324 198 aaKnown RBP15.05■□□□□ -0
SNRPA1-207ENST00000559309 SIT1Q9Y3P8 196 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 KMT2EQ8IZD2 1858 aa15.05■□□□□ -0
SNRPA1-207ENST00000559309 ATG2BQ96BY7 2078 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 EDDM13A0A1B0GTR0 161 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 CCDC188H7C350 402 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 KCNK1O00180 336 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 KRIT1O00522 736 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 ALOX15BO15296 676 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 GCATO75600 419 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 HLA-DQB2P05538 268 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 TIE1P35590 1138 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 COILP38432 576 aaPredicted RBP15.04■□□□□ -0
SNRPA1-207ENST00000559309 MMP13P45452 471 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 COPAP53621 1224 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 AP1B1Q10567 949 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 SLC14A2Q15849 920 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 WHAMMP3Q1A5X7 153 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 CCDC181Q5TID7 509 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 MARC1Q5VT66 337 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 TMEM92Q6UXU6 159 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 LEKR1Q6ZMV7 388 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 B4GALNT4Q76KP1 1039 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 ZNF567Q8N184 647 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 SPEM1Q8N4L4 309 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 TXNDC5Q8NBS9 432 aaKnown RBP15.04■□□□□ -0
SNRPA1-207ENST00000559309 CCNYQ8ND76 341 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 SPATA4Q8NEY3 305 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 OR2AP1Q8NGE2 309 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 RPLP0P6Q8NHW5 317 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 CAPZA3Q96KX2 299 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 GORASP1Q9BQQ3 440 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 AP1M1Q9BXS5 423 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 CPEB1Q9BZB8 566 aaKnown RBP15.04■□□□□ -0
SNRPA1-207ENST00000559309 C10orf88Q9H8K7 445 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 ZDHHC4Q9NPG8 344 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 C2orf42Q9NWW7 574 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 SUN2Q9UH99 717 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 WASF2Q9Y6W5 498 aa15.04■□□□□ -0
SNRPA1-207ENST00000559309 SIN3BO75182 1162 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 KLF8O95600 359 aaPredicted RBP15.03■□□□□ -0
SNRPA1-207ENST00000559309 JCHAINP01591 159 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 MMP2P08253 660 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 HLA-EP13747 358 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 CHRNA3P32297 505 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 NNMTP40261 264 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 PTGIRP43119 386 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 NRLP54845 237 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 SEC13P55735 322 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 ST8SIA6P61647 398 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 CRY1Q16526 586 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 P3H1Q32P28 736 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 CARD16Q5EG05 197 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 EOGTQ5NDL2 527 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 HEATR6Q6AI08 1181 aaKnown RBP15.03■□□□□ -0
SNRPA1-207ENST00000559309 SERPINA13PQ6UXR4 307 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 Q6ZVU0 165 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 CHPFQ8IZ52 775 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 GLIS1Q8NBF1 620 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 NUDCD1Q96RS6 583 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 TMEM121Q9BTD3 319 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 RSPH9Q9H1X1 276 aaPredicted RBP15.03■□□□□ -0
SNRPA1-207ENST00000559309 MTG2Q9H4K7 406 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 FBRSQ9HAH7 460 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 RBM22Q9NW64 420 aaKnown RBP eCLIP15.03■□□□□ -03e-9■■■■■ 38.6
SNRPA1-207ENST00000559309 TRHDEQ9UKU6 1024 aa15.03■□□□□ -0
SNRPA1-207ENST00000559309 ANKRD36A6QL64 1941 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms