RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 FAR1Q8WVX9 515 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 H2AFJQ9BTM1 129 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 ACTR5Q9H9F9 607 aaPredicted RBP4.71□□□□□ -1.66
CASC4-206ENST00000558847 BRF2Q9HAW0 419 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 ATP8A2Q9NTI2 1148 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 HAUS2Q9NVX0 235 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 BABAM1Q9NWV8 329 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 KIAA1456Q9P272 454 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 VPS28Q9UK41 221 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.71□□□□□ -1.66
CASC4-206ENST00000558847 ARHGEF17Q96PE2 2063 aaPredicted RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 A0A1W2PQM1 296 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 TCRBV7S3A2A0A539 114 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 LRRC53A6NM62 1247 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 C17orf100A8MU93 164 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 INO80B-WBP1J3KQ70 363 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 AP3D1O14617 1153 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 RNMTO43148 476 aaKnown RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 DDAH2O95865 285 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 ADAP00813 363 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 GALTP07902 379 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 HOXA7P31268 230 aaPredicted RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 KRTAP10-11P60412 298 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 PRAMEP78395 509 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 CYP4A11Q02928 519 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 SLC10A2Q12908 348 aaPredicted RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 ZNF268Q14587 947 aaPredicted RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 TAF11Q15544 211 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 HIST2H2ACQ16777 129 aaPredicted RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 DPCR1Q3MIW9 517 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 SLC9B1Q4ZJI4 515 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 AWAT1Q58HT5 328 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 ALG10Q5BKT4 473 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 ALG10BQ5I7T1 473 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 TTC39AQ5SRH9 613 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 SERTAD4-AS1Q5TG53 156 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 FAM205BPQ63HN1 556 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 SARM1Q6SZW1 724 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 ZNF788Q6ZQV5 615 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 SLC46A3Q7Z3Q1 461 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 WDR5BQ86VZ2 330 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 TMC8Q8IU68 726 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 PDILTQ8N807 584 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 NSUN4Q96CB9 384 aaKnown RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 CCDC34Q96HJ3 373 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 RSRC1Q96IZ7 334 aaKnown RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 KLHL15Q96M94 604 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 MAP7D2Q96T17 732 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 FAM118BQ9BPY3 351 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 EFHD1Q9BUP0 239 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 TM2D2Q9BX73 214 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 PAPOLBQ9NRJ5 636 aaKnown RBP4.7□□□□□ -1.66
CASC4-206ENST00000558847 RNF146Q9NTX7 359 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 HCFC1R1Q9NWW0 138 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 ZDHHC7Q9NXF8 308 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 HDAC6Q9UBN7 1215 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 POLG2Q9UHN1 485 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 ICKQ9UPZ9 632 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 PCDHGB5Q9Y5G0 923 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 PSAT1Q9Y617 370 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 AOX1Q06278 1338 aa4.7□□□□□ -1.66
CASC4-206ENST00000558847 C17orf102A2RUQ5 167 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 A6NCN8 305 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 EIF3CLB5ME19 914 aaKnown RBP4.69□□□□□ -1.66
CASC4-206ENST00000558847 F8W810 466 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 PRPF4O43172 522 aaKnown RBP eCLIP4.69□□□□□ -1.66
CASC4-206ENST00000558847 PTP4A3O75365 173 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 HOXB5P09067 269 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 PCNAP12004 261 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 PTPN2P17706 415 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 CLCNKBP51801 687 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 OLR1P78380 273 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 NUCB1Q02818 461 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 TFF2Q03403 129 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 ZBTB16Q05516 673 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 CRYMQ14894 314 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 ZNF667Q5HYK9 610 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 KIAA1755Q5JYT7 1200 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 NCEH1Q6PIU2 408 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 FAM160B2Q86V87 743 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 ZDHHC23Q8IYP9 409 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 DPP10Q8N608 796 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 PLD5Q8N7P1 536 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 SEMA6DQ8NFY4 1073 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 CREB3L4Q8TEY5 395 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 HASPINQ8TF76 798 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 SCFD2Q8WU76 684 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 USP6NLQ92738 828 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 ARHGEF2Q92974 986 aaKnown RBP4.69□□□□□ -1.66
CASC4-206ENST00000558847 OTULINQ96BN8 352 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 NEUROD6Q96NK8 337 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 USP44Q9H0E7 712 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 TTYH1Q9H313 450 aaPredicted RBP4.69□□□□□ -1.66
CASC4-206ENST00000558847 C20orf141Q9NUB4 165 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 FBXO4Q9UKT5 387 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 FRMD4BQ9Y2L6 1034 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 KCNE2Q9Y6J6 123 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 PIAS3Q9Y6X2 628 aa4.69□□□□□ -1.66
CASC4-206ENST00000558847 MST1RQ04912 1400 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms