RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 EFSO43281 561 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 SNAP91O60641 907 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 LEFTY1O75610 366 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 FAM87AP0C7U9 286 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 KRT5P13647 590 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 ADRB3P13945 408 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 FMO5P49326 533 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 ADKP55263 362 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 PITX1P78337 314 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 PRRT3Q5FWE3 981 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 KRBA2Q6ZNG9 492 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 RRAGAQ7L523 313 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 RAB11FIP2Q7L804 512 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 KAT5Q92993 513 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 SPATA32Q96LK8 384 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 SLC4A5Q9BY07 1137 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 SIK2Q9H0K1 926 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 METTL14Q9HCE5 456 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 VPS51Q9UID3 782 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 PADI4Q9UM07 663 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 TBC1D30Q9Y2I9 924 aa18.19■□□□□ 0.5
TSPAN3-204ENST00000558394 K7ERQ8 282 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 NEMP1O14524 444 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 RAD51BO15315 384 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 PPFIA2O75334 1257 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 ENDOD1O94919 500 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 AFPP02771 609 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 JMJD7P0C870 316 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 NME3Q13232 169 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 C1orf61Q13536 156 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 FGL2Q14314 439 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 MANEAQ5SRI9 462 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 DENND1BQ6P3S1 775 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 SLC35F3Q8IY50 421 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 DEFB106AQ8N104 65 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 SLC13A1Q9BZW2 595 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 TNKS2Q9H2K2 1166 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 RMND1Q9NWS8 449 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 HS3ST4Q9Y661 456 aa18.18■□□□□ 0.5
TSPAN3-204ENST00000558394 LMO7DNF2Z398 122 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 M0QYT0 321 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 SMAD6O43541 496 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 LIPCP11150 499 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 ITGB6P18564 788 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 ITGB7P26010 798 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 NOS2P35228 1153 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 UGT1A5P35504 534 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 GGCXP38435 758 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 PRCPP42785 496 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 DNA2P51530 1060 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 IRAK1P51617 712 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 PDX1P52945 283 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 EIF4EBP2Q13542 120 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 TGIF1Q15583 401 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 FAXCQ5TGI0 409 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 LINGO4Q6UY18 593 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 DPY19L3Q6ZPD9 716 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 TMEM110Q86TL2 294 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 PHACTR4Q8IZ21 702 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 RBFAQ8N0V3 343 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 DCAF4L2Q8NA75 395 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 SCG3Q8WXD2 468 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 LENG8Q96PV6 779 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 GFM1Q96RP9 751 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 SEMA3CQ99985 751 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 ANKMY1Q9P2S6 941 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 GULP1Q9UBP9 304 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 PCDHB11Q9Y5F2 797 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 FADS3Q9Y5Q0 445 aa18.17■□□□□ 0.5
TSPAN3-204ENST00000558394 SPINT1O43278 529 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 AP1G1O43747 822 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 LETM1O95202 739 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 ADCY5O95622 1261 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 GLI1P08151 1106 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 L1CAMP32004 1257 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 GCNT1Q02742 428 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 EIF2B5Q13144 721 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 TAF5Q15542 800 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 EFHC1Q5JVL4 640 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 ANKRD40Q6AI12 368 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 RETSATQ6NUM9 610 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 DENND6BQ8NEG7 585 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 PPP1R13BQ96KQ4 1090 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 TMEM74Q96NL1 305 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 PSMB7Q99436 277 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 HEPHQ9BQS7 1158 aa18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 UBR5O95071 2799 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-204ENST00000558394 IGLON5A6NGN9 336 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 RNF103O00237 685 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 NTN3O00634 580 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 THAP12O43422 761 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 TSPAN6O43657 245 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 HSF2BPO75031 334 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 PAGE1O75459 146 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 GCATO75600 419 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 CNTN5O94779 1100 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 TLE1Q04724 770 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 LRRC63Q05C16 580 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 MEA1Q16626 185 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms