RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 EPS15L1Q9UBC2 864 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 BCAP29Q9UHQ4 241 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 PAPPA2Q9BXP8 1791 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 WDR90Q96KV7 1748 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 E7ENX8 843 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 JCHAINP01591 159 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 IGFBP6P24592 240 aaPredicted RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 RPL10P27635 214 aaKnown RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 EPHX2P34913 555 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 NOS2P35228 1153 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 RPL34P49207 117 aaKnown RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 CSE1LP55060 971 aaKnown RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 PDAP1Q13442 181 aaKnown RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 MYBPC3Q14896 1274 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 TSTD2Q5T7W7 516 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 LRRC8EQ6NSJ5 796 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 LAYNQ6UX15 382 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 SETD3Q86TU7 594 aaPredicted RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 KDM1BQ8NB78 822 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 STYXQ8WUJ0 223 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 CELF6Q96J87 481 aaKnown RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 NPY6RQ99463 290 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 FAM124BQ9H5Z6 455 aaPredicted RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 AP4S1Q9Y587 144 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 PCDHGA7Q9Y5G6 932 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 CEPT1Q9Y6K0 416 aa11.55□□□□□ -0.56
SRP54-213ENST00000556994 POLR2AP24928 1970 aaKnown RBP11.55□□□□□ -0.56
SRP54-213ENST00000556994 NRP1O14786 923 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 PFDN1O60925 122 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TADA2AO75478 443 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 PGK1P00558 417 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 ADRA1BP35368 520 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 SCNN1AP37088 669 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 BAG6P46379 1132 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 NR1H2P55055 460 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TPI1P60174 286 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 PSME3P61289 254 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 SLC12A1Q13621 1099 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CNSTQ6PJW8 725 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 KDELC2Q7Z4H8 507 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TMEM126BQ8IUX1 230 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 MFSD6LQ8IWD5 586 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 LRRC52Q8N7C0 313 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TRIML2Q8N7C3 387 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TSPAN14Q8NG11 270 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 SPATA22Q8NHS9 363 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 DLG3Q92796 817 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 WNT8BQ93098 351 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 SLC29A1Q99808 456 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CCT7Q99832 543 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 SLC2A11Q9BYW1 496 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 FAM49AQ9H0Q0 323 aaPredicted RBP11.54□□□□□ -0.56
SRP54-213ENST00000556994 TRPV6Q9H1D0 765 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 GBA3Q9H227 469 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CAAP1Q9H8G2 361 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CYP4F12Q9HCS2 524 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TRPC7Q9HCX4 862 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TNFRSF12AQ9NP84 129 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 PLK2Q9NYY3 685 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 RBPJLQ9UBG7 517 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 VTI1BQ9UEU0 232 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TLL2Q9Y6L7 1015 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 ARHGEF37A1IGU5 675 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TARM1B6A8C7 271 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 C9IYK1 514 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TRIM38O00635 465 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 SDHDO14521 159 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 DAB1O75553 588 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 TRMUO75648 421 aaKnown RBP11.54□□□□□ -0.56
SRP54-213ENST00000556994 RECQL4O94761 1208 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 MT-CO1P00395 513 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 APOA4P06727 396 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CDH2P19022 906 aaPredicted RBP11.54□□□□□ -0.56
SRP54-213ENST00000556994 GALK1P51570 392 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 MAP3K7CLP57077 242 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 COG7P83436 770 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 PPIDQ08752 370 aaKnown RBP11.54□□□□□ -0.56
SRP54-213ENST00000556994 POU6F1Q14863 301 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 PPP1R3AQ16821 1122 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CATSPER4Q7RTX7 472 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 OSTM1Q86WC4 334 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 RNF135Q8IUD6 432 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 NUP93Q8N1F7 819 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 APPL2Q8NEU8 664 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 FAM110BQ8TC76 370 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 DDI1Q8WTU0 396 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 NT5C3BQ969T7 300 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CIB1Q99828 191 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 RHOJQ9H4E5 214 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 ELP3Q9H9T3 547 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 LRRC4Q9HBW1 653 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 CCDC167Q9P0B6 97 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 GMPR2Q9P2T1 348 aaKnown RBP11.54□□□□□ -0.56
SRP54-213ENST00000556994 MID2Q9UJV3 735 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 ACOT9Q9Y305 439 aa11.54□□□□□ -0.56
SRP54-213ENST00000556994 DNAJC25-GNG10A0A024R161 153 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms