RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GPSM3Q9Y4H4 160 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 APC2O95996 2303 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 ZFYVE26Q68DK2 2539 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 DOCK4Q8N1I0 1966 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 COL5A1P20908 1838 aaPredicted RBP23.03■■□□□ 1.28
ACTN1-220ENST00000556433 FAM72CH0Y354 149 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 CD160O95971 181 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 PLEKP08567 350 aaPredicted RBP23.03■■□□□ 1.28
ACTN1-220ENST00000556433 CKMT2P17540 419 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 ETFBP38117 255 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 CCNHP51946 323 aaPredicted RBP23.03■■□□□ 1.28
ACTN1-220ENST00000556433 NEK3P51956 506 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 CLDN6P56747 220 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 FAM72AQ5TYM5 149 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 MANEALQ5VSG8 457 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 SEL1L3Q68CR1 1132 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 FAM72DQ6L9T8 149 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 FBXL19Q6PCT2 694 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 FAM72BQ86X60 149 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 CENPIQ92674 756 aaPredicted RBP23.03■■□□□ 1.28
ACTN1-220ENST00000556433 ANO10Q9NW15 660 aa23.03■■□□□ 1.28
ACTN1-220ENST00000556433 HECAQ9UBI9 543 aaPredicted RBP23.03■■□□□ 1.28
ACTN1-220ENST00000556433 LIMA1Q9UHB6 759 aaKnown RBP23.03■■□□□ 1.28
ACTN1-220ENST00000556433 WDFY3Q8IZQ1 3526 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 LRIG2O94898 1065 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 ADRB3P13945 408 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 ITGB7P26010 798 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 L1CAMP32004 1257 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 RFC1P35251 1148 aaPredicted RBP23.02■■□□□ 1.28
ACTN1-220ENST00000556433 MAPKAPK2P49137 400 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 HDAC4P56524 1084 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 CLDN2P57739 230 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 CLEC16AQ2KHT3 1053 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 NLRP14Q86W24 1093 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 SLC25A45Q8N413 288 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 RYBPQ8N488 228 aaPredicted RBP23.02■■□□□ 1.28
ACTN1-220ENST00000556433 CCDC185Q8N715 623 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 OR13H1Q8NG92 308 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 FAM172AQ8WUF8 416 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 ARHGEF2Q92974 986 aaKnown RBP23.02■■□□□ 1.28
ACTN1-220ENST00000556433 TBC1D31Q96DN5 1066 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 FEM1CQ96JP0 617 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 SELENOOQ9BVL4 669 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 CALN1Q9BXU9 219 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 TM6SF2Q9BZW4 377 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 SEPT11Q9NVA2 429 aaKnown RBP23.02■■□□□ 1.28
ACTN1-220ENST00000556433 TMEM248Q9NWD8 314 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 CACNA1GO43497 2377 aa23.02■■□□□ 1.28
ACTN1-220ENST00000556433 ARID1BQ8NFD5 2236 aaPredicted RBP23.02■■□□□ 1.28
ACTN1-220ENST00000556433 URB1O60287 2271 aaKnown RBP23.01■■□□□ 1.27
ACTN1-220ENST00000556433 CXorf51AA0A1B0GTR3 108 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 CDK11BP21127 795 aaKnown RBP23.01■■□□□ 1.27
ACTN1-220ENST00000556433 HNF1BP35680 557 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 RPS21P63220 83 aaKnown RBP23.01■■□□□ 1.27
ACTN1-220ENST00000556433 MYL5Q02045 173 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 UBXN1Q04323 297 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 MAPK8IP2Q13387 824 aaPredicted RBP23.01■■□□□ 1.27
ACTN1-220ENST00000556433 TMEM259Q4ZIN3 620 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 PHF13Q86YI8 300 aaPredicted RBP23.01■■□□□ 1.27
ACTN1-220ENST00000556433 PLPP6Q8IY26 295 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 HNRNPLLQ8WVV9 542 aaKnown RBP23.01■■□□□ 1.27
ACTN1-220ENST00000556433 ISG20Q96AZ6 181 aaKnown RBP23.01■■□□□ 1.27
ACTN1-220ENST00000556433 GBP4Q96PP9 640 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 SLC17A9Q9BYT1 436 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 MAGEH1Q9H213 219 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 ZDHHC6Q9H6R6 413 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 HPCAL4Q9UM19 191 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 FADS3Q9Y5Q0 445 aa23.01■■□□□ 1.27
ACTN1-220ENST00000556433 LGALS16A8MUM7 142 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 TRIM38O00635 465 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 SIGLEC6O43699 453 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 PAK4O96013 591 aaPredicted RBP23■■□□□ 1.27
ACTN1-220ENST00000556433 CALB1P05937 261 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 GPD1P21695 349 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 DGKAP23743 735 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 GSCP56915 257 aaPredicted RBP23■■□□□ 1.27
ACTN1-220ENST00000556433 GEMIN4P57678 1058 aaKnown RBP23■■□□□ 1.27
ACTN1-220ENST00000556433 ZNF211Q13398 564 aaPredicted RBP23■■□□□ 1.27
ACTN1-220ENST00000556433 ILKQ13418 452 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 KIAA1161Q6NSJ0 714 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 WDR59Q6PJI9 974 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 LEKR1Q6ZMV7 388 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 GCNT7Q6ZNI0 430 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 Q6ZSR6 202 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 OR6K2Q8NGY2 324 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 HS3ST3A1Q9Y663 406 aa23■■□□□ 1.27
ACTN1-220ENST00000556433 LRRC10BA6NIK2 292 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 SIGLEC16A6NMB1 481 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 RAMP2O60895 175 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 GKP32189 559 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 TARDBPQ13148 414 aaKnown RBP eCLIP22.99■■□□□ 1.27
ACTN1-220ENST00000556433 POLD3Q15054 466 aaPredicted RBP22.99■■□□□ 1.27
ACTN1-220ENST00000556433 STX1AQ16623 288 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 COL28A1Q2UY09 1125 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 PROX2Q3B8N5 592 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 HS1BP3Q53T59 392 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 HES3Q5TGS1 186 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 PARS2Q7L3T8 475 aaKnown RBP22.99■■□□□ 1.27
ACTN1-220ENST00000556433 ABI3BPQ7Z7G0 1075 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 SLFN11Q7Z7L1 901 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms