RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 THOP1P52888 689 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 ADKP55263 362 aaKnown RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 YWHAZP63104 245 aaKnown RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 EIF3IQ13347 325 aaKnown RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 AUHQ13825 339 aaKnown RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 FGL2Q14314 439 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 LINGO4Q6UY18 593 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 BEND5Q7L4P6 421 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 B3GNT8Q7Z7M8 397 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 SMYD4Q8IYR2 804 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 KAT5Q92993 513 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 MED15Q96RN5 788 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 GFM1Q96RP9 751 aaKnown RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 TSG101Q99816 390 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 BOCQ9BWV1 1114 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 SLC13A1Q9BZW2 595 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 GPR27Q9NS67 375 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 SIRPGQ9P1W8 387 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 VPS51Q9UID3 782 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 E5RJQ4 531 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 K7ELQ4 463 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 RNF103O00237 685 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 NEMP1O14524 444 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 SPINT1O43278 529 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 SMAD6O43541 496 aaKnown RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 GCATO75600 419 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 LEFTY1O75610 366 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 F13A1P00488 732 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 IGLV3-25P01717 112 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 ZSCAN22P10073 491 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 LIPCP11150 499 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 GP1BBP13224 206 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 ADRB3P13945 408 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 MCCD1P59942 119 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 DPYDQ12882 1025 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 EIF2B5Q13144 721 aaKnown RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 UBAP2LQ14157 1087 aaKnown RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 TBR1Q16650 682 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 TPRG1LQ5T0D9 272 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 ATL3Q6DD88 541 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 C22orf39Q6P5X5 142 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 PHACTR4Q8IZ21 702 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 SRRTQ9BXP5 876 aaKnown RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 SIK2Q9H0K1 926 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 TCEAL2Q9H3H9 227 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 ARMCX3Q9UH62 379 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-219ENST00000556432 PCDHGA4Q9Y5G9 962 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 OR51B4Q9Y5P0 310 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 NOTCH2Q04721 2471 aa14.22□□□□□ -0.13
ACTN1-219ENST00000556432 IGLON5A6NGN9 336 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 D6RAR5 112 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 LMO7DNF2Z398 122 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 TMX2-CTNND1H3BSU7 103 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 NOBOXO60393 691 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 ADCY5O95622 1261 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 KRT5P13647 590 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 CMA1P23946 247 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 NOS2P35228 1153 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 GPD2P43304 727 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 CYP4F2P78329 520 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 NME3Q13232 169 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 TCEA2Q15560 299 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 FAXCQ5TGI0 409 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 DENND1BQ6P3S1 775 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 DPY19L3Q6ZPD9 716 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 RRAGAQ7L523 313 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 CCDC74AQ96AQ1 378 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 SEMA3CQ99985 751 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 LRRC61Q9BV99 259 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 SLC25A18Q9H1K4 315 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 THAP9Q9H5L6 903 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 PCDHB11Q9Y5F2 797 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 FADS3Q9Y5Q0 445 aa14.21□□□□□ -0.13
ACTN1-219ENST00000556432 NBASA2RRP1 2371 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 USP9XQ93008 2570 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-219ENST00000556432 M0QYT0 321 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 RPLP0P05388 317 aaKnown RBP14.2□□□□□ -0.14
ACTN1-219ENST00000556432 ITGB7P26010 798 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 FMO5P49326 533 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 CLCN6P51797 869 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 CDH4P55283 916 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 PTK2BQ14289 1009 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 TAF5Q15542 800 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 PTRH1Q86Y79 214 aaKnown RBP14.2□□□□□ -0.14
ACTN1-219ENST00000556432 SDR16C5Q8N3Y7 309 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 KYQ8NBH2 561 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 SCG3Q8WXD2 468 aaKnown RBP14.2□□□□□ -0.14
ACTN1-219ENST00000556432 SLC35C1Q96A29 364 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 PSMB7Q99436 277 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 CPEB1Q9BZB8 566 aaKnown RBP14.2□□□□□ -0.14
ACTN1-219ENST00000556432 RCOR1Q9UKL0 485 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 TBC1D30Q9Y2I9 924 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 LOXL2Q9Y4K0 774 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 HS3ST4Q9Y661 456 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 MYO9AB2RTY4 2548 aa14.2□□□□□ -0.14
ACTN1-219ENST00000556432 NTN3O00634 580 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-219ENST00000556432 YY2O15391 372 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 PAGE1O75459 146 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 GRAP2O75791 330 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms