RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 H3BQV1 296 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 GCOM1H8Y6P7 765 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 PRPF3O43395 683 aaKnown RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 STX6O43752 255 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 UFL1O94874 794 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 SLITRK3O94933 977 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 SNX4O95219 450 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 POP4O95707 220 aaKnown RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 NPPAP01160 153 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 KRT6AP02538 564 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 TFRCP02786 760 aaKnown RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 KRT6BP04259 564 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ALOX5P09917 674 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 MYZAPP0CAP1 466 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CALM1P0DP23 149 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CALM2P0DP24 149 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CALM3P0DP25 149 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 XPAP23025 273 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 SFPQP23246 707 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 DDX6P26196 483 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CD38P28907 300 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 AXLP30530 894 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ATP6V1E1P36543 226 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 BMPR1AP36894 532 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 STAT6P42226 847 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 AP3M2P53677 418 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 POLR2GP62487 172 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 APBA1Q02410 837 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 PRKCZQ05513 592 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 GALNT1Q10472 559 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 TBL3Q12788 808 aaKnown RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 XRCC4Q13426 336 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 NR1D2Q14995 579 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 STK38Q15208 465 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 LETM2Q2VYF4 491 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 KLHL38Q2WGJ6 581 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 MYLK3Q32MK0 819 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 SUPT20HL1Q3ZLR7 823 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 IGSF11Q5DX21 431 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF658Q5TYW1 1059 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ANO1Q5XXA6 986 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 DRICH1Q6PGQ1 229 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 KDELC1Q6UW63 502 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ABHD15Q6UXT9 468 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 GALNT7Q86SF2 657 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 TBC1D21Q8IYX1 336 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 XXYLT1Q8NBI6 393 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 C7orf57Q8NEG2 295 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ENKURQ8TC29 256 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ASB10Q8WXI3 467 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CELF1Q92879 486 aaKnown RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CAVIN3Q969G5 261 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 HAUS1Q96CS2 278 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CNDP2Q96KP4 475 aaKnown RBP4.57□□□□□ -1.68
ATXN3-227ENST00000554491 EGLN2Q96KS0 407 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 NEU1Q99519 415 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 SIKE1Q9BRV8 207 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ERP44Q9BS26 406 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 LRFN3Q9BTN0 628 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 NUP58Q9BVL2 599 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ANO3Q9BYT9 981 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 MTMR12Q9C0I1 747 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ADNPQ9H2P0 1102 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 CNGB3Q9NQW8 809 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 SDHAF3Q9NRP4 125 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ATP8A2Q9NTI2 1148 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ARMC1Q9NVT9 282 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 THAP1Q9NVV9 213 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 RHBDL2Q9NX52 303 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 TMEM260Q9NX78 707 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 THEGQ9P2T0 379 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 TRIM10Q9UDY6 481 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ANAPC5Q9UJX4 755 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 AGTPBP1Q9UPW5 1226 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 NUMBLQ9Y6R0 609 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 COMMD3-BMI1R4GMX3 469 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 PHLPP2Q6ZVD8 1323 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PIPSLA2A3N6 862 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 DPPA5A6NC42 116 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8JA6NMD2 632 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SNTNA6NMZ2 147 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SYCE1LA8MT33 242 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CENPBD1B2RD01 187 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 F8W810 466 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8RI6L899 631 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 INO80B-WBP1J3KQ70 363 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 HIP1O00291 1037 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 E2F3O00716 465 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ZBTB43O43298 467 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 NRP2O60462 931 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 PRAMEF4O60810 478 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 TMEM127O75204 238 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 SPDEFO95238 335 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 ANP32DO95626 131 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 OXSR1O95747 527 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 BAG3O95817 575 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 HLA-DRAP01903 254 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 LTA4HP09960 611 aaKnown RBP4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CLEC2LP0C7M8 214 aa4.56□□□□□ -1.68
ATXN3-227ENST00000554491 CHRNB1P11230 501 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms