RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 LRRC42Q9Y546 428 aa12.39□□□□□ -0.43
LRP1-207ENST00000554174 DOCK4Q8N1I0 1966 aa12.39□□□□□ -0.43
LRP1-207ENST00000554174 TTC24A2A3L6 582 aaPredicted RBP12.38□□□□□ -0.43
LRP1-207ENST00000554174 J3KR12 359 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 AURKAO14965 403 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 PSMD3O43242 534 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 TRIM13O60858 407 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 TM7SF2O76062 418 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 CNTN5O94779 1100 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 PSMG1O95456 288 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 HSPA4LO95757 839 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 ATP5BP06576 529 aaKnown RBP12.38□□□□□ -0.43
LRP1-207ENST00000554174 SKIP12755 728 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 TAF11Q15544 211 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 TBCCQ15814 346 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 ALFQ53S48 1182 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 RANBP10Q6VN20 620 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 CNTN4Q8IWV2 1026 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 SCUBE1Q8IWY4 988 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 ZNF683Q8IZ20 524 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 SLC39A13Q96H72 371 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 PANX3Q96QZ0 392 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 CDH19Q9H159 772 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 STN1Q9H668 368 aaKnown RBP12.38□□□□□ -0.43
LRP1-207ENST00000554174 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 OXSMQ9NWU1 459 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 GMIPQ9P107 970 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 IPO11Q9UI26 975 aaKnown RBP12.38□□□□□ -0.43
LRP1-207ENST00000554174 SCML2Q9UQR0 700 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 TCAF1Q9Y4C2 921 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 THSD7BQ9C0I4 1608 aa12.38□□□□□ -0.43
LRP1-207ENST00000554174 AP3B1O00203 1094 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 ZBTB14O43829 449 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 LMNAP02545 664 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 SLC1A2P43004 574 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 ACLYP53396 1101 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 MAXP61244 160 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 DLG1Q12959 904 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 RALGPS1Q5JS13 557 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 SLC24A5Q71RS6 500 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 MON1AQ86VX9 555 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 NUP93Q8N1F7 819 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 FSTL5Q8N475 847 aaPredicted RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 SERPINB11Q96P15 392 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 KLHL5Q96PQ7 755 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 FSD1LQ9BXM9 530 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 TREX1Q9NSU2 369 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 SORCS3Q9UPU3 1222 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 TLR6Q9Y2C9 796 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 TLL2Q9Y6L7 1015 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 WASF2Q9Y6W5 498 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 A0A088AWK7 358 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 E9PBE3 544 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 KLHL41O60662 606 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 SORBS2O94875 1100 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 NCF2P19878 526 aaPredicted RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 MPSTP25325 297 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 HTR7P34969 479 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 GEMP55040 296 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 MXRA7P84157 204 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 PSMD5Q16401 504 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 MS4A13Q5J8X5 152 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 EPGNQ6UW88 154 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 RIPOR1Q6ZS17 1223 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 SLC25A41Q8N5S1 370 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 TDRD5Q8NAT2 981 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 PPHLN1Q8NEY8 458 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 HMCESQ96FZ2 354 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 NAF1Q96HR8 494 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 PPP1R36Q96LQ0 422 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 OR52B2Q96RD2 323 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 C1orf21Q9H246 121 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 ENTPD7Q9NQZ7 604 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 TLK1Q9UKI8 766 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 RUVBL2Q9Y230 463 aaKnown RBP12.37□□□□□ -0.43
LRP1-207ENST00000554174 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 PLXNA3P51805 1871 aa12.37□□□□□ -0.43
LRP1-207ENST00000554174 LOC100653049A0A140TA62 436 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 EIF4E1BA6NMX2 242 aaKnown RBP12.36□□□□□ -0.43
LRP1-207ENST00000554174 TARM1B6A8C7 271 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 DCXO43602 365 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 ZMPSTE24O75844 475 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 KRT34O76011 436 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 PAX3P23760 479 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 DNAJB2P25686 324 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 ABL2P42684 1182 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 GRIA4P48058 902 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 WNT3AP56704 352 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 SLC10A7Q0GE19 358 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 EFEMP1Q12805 493 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 SEPT6Q14141 434 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 ZNF789Q5FWF6 425 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
LRP1-207ENST00000554174 TRIM68Q6AZZ1 485 aa12.36□□□□□ -0.43
LRP1-207ENST00000554174 ZNF470Q6ECI4 717 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms