RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CLHC1Q8NHS4 586 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 TRUB1Q8WWH5 349 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 WDR77Q9BQA1 342 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 OSBPL11Q9BXB4 747 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF768Q9H5H4 540 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CDY2AQ9Y6F7 541 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 POTEMA6NI47 508 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 E9PI62 339 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC22A1O15245 554 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 PRKCGP05129 697 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CXCR2P25025 360 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CD79BP40259 229 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 ATAD3CQ5T2N8 411 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 DHRSXQ8N5I4 330 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 TEX19Q8NA77 164 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 DNMT3LQ9UJW3 386 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 VAV3Q9UKW4 847 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 FOXN2P32314 431 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 IL15P40933 162 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 MAPK7Q13164 816 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 PIWIL3Q7Z3Z3 882 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 METTL25Q8N6Q8 603 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 USP7Q93009 1102 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 TLCD1Q96CP7 247 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 NECTIN4Q96NY8 510 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 PHOX2BQ99453 314 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 DPCDQ9BVM2 203 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 FNIP2Q9P278 1114 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 DCXO43602 365 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 RNF224P0DH78 156 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP3A5P20815 502 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CASP6P55212 293 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 IL5RAQ01344 420 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 NPTX1Q15818 432 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC18A3Q16572 532 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 FNBP1LQ5T0N5 605 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CHPFQ8IZ52 775 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SH3RF3Q8TEJ3 882 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CHPT1Q8WUD6 406 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 GTPBP3Q969Y2 492 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 ALPK1Q96QP1 1244 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 NCKIPSDQ9NZQ3 722 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 EIF3KQ9UBQ5 218 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF223Q9UK11 482 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 F8W8V4 182 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CHL1O00533 1208 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 DCLK1O15075 740 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 GMFGO60234 142 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 RGS19P49795 217 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 FKBP3Q00688 224 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 DESI1Q6ICB0 168 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SPATC1Q76KD6 591 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CUZD1Q86UP6 607 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 LRRC17Q8N6Y2 441 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SNX33Q8WV41 574 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 BCL7BQ9BQE9 202 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 MRM3Q9HC36 420 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 PLSCR3Q9NRY6 295 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC27A5Q9Y2P5 690 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 A0A1W2PP64 1363 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 C2CD2LO14523 706 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 EDF1O60869 148 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CCNE2O96020 404 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 RPL10P27635 214 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 GNALP38405 381 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 KCNC1P48547 511 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CASP4P49662 377 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SCNN1DP51172 638 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ARFIP1P53367 373 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF720Q7Z2F6 126 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CPNE9Q8IYJ1 553 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF565Q8N9K5 539 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 REXO5Q96IC2 774 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 EGFL8Q99944 293 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 BDH2Q9BUT1 245 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC2A11Q9BYW1 496 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 LRRC4BQ9NT99 713 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC39A1Q9NY26 324 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PADI4Q9UM07 663 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 KDM6BO15054 1643 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 H7C1Q1 480 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 WRBO00258 174 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 TRIM13O60858 407 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PBLDP30039 288 aaPredicted RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SNTA1Q13424 505 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 DRAP1Q14919 205 aaPredicted RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 HYAL4Q2M3T9 481 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ARHGAP17Q68EM7 881 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 TRABD2AQ86V40 505 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 LRRTM3Q86VH5 581 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 HTATIP2Q9BUP3 242 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 COQ10BQ9H8M1 238 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PLK2Q9NYY3 685 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PLA2R1Q13018 1463 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 KIAA0586Q9BVV6 1533 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms