RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 VPS51Q9UID3 782 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 RWDD2AQ9UIY3 292 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 PPM1HQ9ULR3 514 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ATMQ13315 3056 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 NEMP2A6NFY4 417 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 BECN2A8MW95 431 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 GOLGA8SH3BPF8 625 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SRGAP2O75044 1071 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 CNTN5O94779 1100 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 F9P00740 461 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 BMP6P22004 513 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ACP1P24666 158 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ITPKBP27987 946 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 EIF2S3P41091 472 aaKnown RBP10.13□□□□□ -0.79
ACTN1-208ENST00000553370 DUSP3P51452 185 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-208ENST00000553370 NEK3P51956 506 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 APBA1Q02410 837 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SGCGQ13326 291 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF211Q13398 564 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-208ENST00000553370 CAMK4Q16566 473 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 PTPN20Q4JDL3 420 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 CRTC2Q53ET0 693 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ERN2Q76MJ5 926 aaKnown RBP10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SETD3Q86TU7 594 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-208ENST00000553370 DCAF4L2Q8NA75 395 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 PLPP7Q8NBV4 271 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 OR4C6Q8NH72 309 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SHC3Q92529 594 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 FGF11Q92914 225 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 WNT2BQ93097 391 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SPSB2Q99619 263 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ZDHHC6Q9H6R6 413 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SYNDIG1Q9H7V2 258 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ATP13A1Q9HD20 1204 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 PIGVQ9NUD9 493 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 KLHL11Q9NVR0 708 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 ARHGAP20Q9P2F6 1191 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 DNAJC12Q9UKB3 198 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 HS3ST2Q9Y278 367 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SNX10Q9Y5X0 201 aa10.13□□□□□ -0.79
ACTN1-208ENST00000553370 SPTA1P02549 2419 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 CFAP46Q8IYW2 2715 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 GTPBP10A4D1E9 387 aaKnown RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 TLX3O43711 291 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 MT-CO3P00414 261 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 CTSLP07711 333 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 DGKAP23743 735 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 PON1P27169 355 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 PCBP4P57723 403 aaKnown RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 CLDN2P57739 230 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 HNRNPKP61978 463 aaKnown RBP eCLIP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 RPS21P63220 83 aaKnown RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 CXADRP78310 365 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 INSM1Q01101 510 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 MAN2A1Q16706 1144 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 ALFQ53S48 1182 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF542PQ5EBM4 170 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 ACBD5Q5T8D3 534 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 PIP5KL1Q5T9C9 394 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 TAF3Q5VWG9 929 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 KIAA1161Q6NSJ0 714 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 RWDD4Q6NW29 188 aaKnown RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 NEK5Q6P3R8 708 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 C14orf80Q86SX3 495 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 SLC47A2Q86VL8 602 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 ERICH1Q86X53 443 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 DRC7Q8IY82 874 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 TMIEQ8NEW7 156 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 OR13H1Q8NG92 308 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 OR52K2Q8NGK3 314 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 MAPK15Q8TD08 544 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 ARRDC3Q96B67 414 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 NAF1Q96HR8 494 aaKnown RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 BBC3Q96PG8 261 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-208ENST00000553370 TBCBQ99426 244 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 OSBPL2Q9H1P3 480 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 TMEM51Q9NW97 253 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 MPP6Q9NZW5 540 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 HPCAL4Q9UM19 191 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 TBC1D30Q9Y2I9 924 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 AHCTF1Q8WYP5 2266 aa10.12□□□□□ -0.79
ACTN1-208ENST00000553370 ARHGEF17Q96PE2 2063 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 K7ERQ8 282 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 TRIM38O00635 465 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 FPGTO14772 594 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 SMAD6O43541 496 aaKnown RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 GADD45BO75293 160 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 LEFTY1O75610 366 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 PIAS2O75928 621 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 MT-CO1P00395 513 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 PNMA6AP0CW24 399 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ITGB7P26010 798 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ETFBP38117 255 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 CXCR3P49682 368 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 MMP16P51512 607 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 THOP1P52888 689 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 GEMIN4P57678 1058 aaKnown RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 GABREP78334 506 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms