RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 RINT1Q6NUQ1 792 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 TMEM184AQ6ZMB5 413 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 SRGAP1Q7Z6B7 1085 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 ADGRG3Q86Y34 549 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 TPH2Q8IWU9 490 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 PSPC1Q8WXF1 523 aaKnown RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 MRPS27Q92552 414 aaKnown RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 TMEM125Q96AQ2 219 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 IGSF21Q96ID5 467 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 B3GALT6Q96L58 329 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 ZMAT2Q96NC0 199 aaKnown RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 BBC3Q96PG8 261 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 STRA6Q9BX79 667 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 SMOC2Q9H3U7 446 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 ATP6V0A4Q9HBG4 840 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 CHST12Q9NRB3 414 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 NRBP2Q9NSY0 501 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 DDX19AQ9NUU7 478 aaKnown RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 COG5Q9UP83 839 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 DMTF1Q9Y222 760 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 LZTS1Q9Y250 596 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 CLIC4Q9Y696 253 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 EML5Q05BV3 1969 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 MIA3Q5JRA6 1907 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 PRAMEF33A0A0G2JMD5 474 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 DENND3A2RUS2 1198 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 ARL5CA6NH57 179 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 LOC730098B7Z3J9 87 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 M0QZ92 97 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 MGST3O14880 152 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 PRAMEF10O60809 474 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 SNUPNO95149 360 aaKnown RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 XRCC6P12956 609 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 EPCAMP16422 314 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 PDCP20941 246 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 SYT1P21579 422 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 IBSPP21815 317 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 SFPQP23246 707 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 GATA3P23771 443 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 NRIP1P48552 1158 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 ZNF131P52739 623 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 SIM1P81133 766 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 MRPS35P82673 323 aaKnown RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 CD300EQ496F6 205 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 PLPP4Q5VZY2 271 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 ALKAL1Q6UXT8 129 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 MAEAQ7L5Y9 396 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 CATSPER4Q7RTX7 472 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 CLNKQ7Z7G1 428 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 CFAP52Q8N1V2 620 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 PDPRQ8NCN5 879 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 TMEM161BQ8NDZ6 487 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 ZNF707Q96C28 371 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 LRIG1Q96JA1 1093 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 ZBTB45Q96K62 511 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 PPP1R10Q96QC0 940 aaKnown RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 USP28Q96RU2 1077 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 GAD1Q99259 594 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 NAP1L4Q99733 375 aaKnown RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 GCOM2Q9BZD3 368 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 CDT1Q9H211 546 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 BHMT2Q9H2M3 363 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 MAN1C1Q9NR34 630 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 FOXJ2Q9P0K8 574 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 LRIT1Q9P2V4 623 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 PCDHB7Q9Y5E2 793 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 MORC2Q9Y6X9 1032 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-214ENST00000550893 GVINP1Q7Z2Y8 2422 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 PCSK5Q92824 1860 aa5.3□□□□□ -1.56
SCAF11-214ENST00000550893 SPTBN4Q9H254 2564 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 CCDC195A0A1B0GUA6 201 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 SHISA7A6NL88 538 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 E9PLN8 166 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 PPEF2O14830 753 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 ZC3H11AO75152 810 aaKnown RBP eCLIP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 SUN1O94901 812 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 WEE2P0C1S8 567 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 STAG3L1P0CL83 205 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 CTSAP10619 480 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 XBP1P17861 261 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 MUTP22033 750 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 AKAP5P24588 427 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 TMOD1P28289 359 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 HOXD13P35453 343 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 DDIT3P35638 169 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 CCT6AP40227 531 aaKnown RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 NAMPTP43490 491 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 NPTX2P47972 431 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 RAB27AP51159 221 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 CASP5P51878 434 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 RPS7P62081 194 aaKnown RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 MC2RQ01718 297 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 UBE3AQ05086 875 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 PDIA5Q14554 519 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 KARSQ15046 597 aaKnown RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 SPECC1Q5M775 1068 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 TWF2Q6IBS0 349 aaKnown RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 ANKRD54Q6NXT1 300 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 FBXO42Q6P3S6 717 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms