RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 KIF12Q96FN5 646 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 MCMBPQ9BTE3 642 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 CHRAC1Q9NRG0 131 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 PNPLA3Q9NST1 481 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 SUCOQ9UBS9 1254 aaKnown RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 TLK1Q9UKI8 766 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 A0A087WZ62 844 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 AP2A1O95782 977 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 ARF4P18085 180 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 ENTPD1P49961 510 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 CSE1LP55060 971 aaKnown RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 TNFAIP2Q03169 654 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 PPIL2Q13356 520 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 PDAP1Q13442 181 aaKnown RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 ZNF460Q14592 562 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 ANO4Q32M45 955 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 HERC6Q8IVU3 1022 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 FSTL5Q8N475 847 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 TTC39CQ8N584 583 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 KDM1BQ8NB78 822 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 RDH11Q8TC12 318 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 STYXQ8WUJ0 223 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 RANBP9Q96S59 729 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 FDXACB1Q9BRP7 624 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 ARHGEF38Q9NXL2 777 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 RRN3Q9NYV6 651 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 XPR1Q9UBH6 696 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 SCN1AP35498 2009 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 EVPLQ92817 2033 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 H0YJX3 145 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 SDHDO14521 159 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 DLX3O60479 287 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 CNMDO75829 334 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 SLC35E2BP0CK96 405 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 TPH1P17752 444 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 PTPN3P26045 913 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 SULT1E1P49888 294 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 RHDQ02161 417 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 USP10Q14694 798 aaKnown RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 HMBOX1Q6NT76 420 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 PSTKQ8IV42 348 aaKnown RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 CENPLQ8N0S6 344 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 SPATA6LQ8N4H0 392 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 OR6B3Q8NGW1 331 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 HMGCLL1Q8TB92 370 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 LPGAT1Q92604 370 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 GFM2Q969S9 779 aaKnown RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 BIRC8Q96P09 236 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 GPR22Q99680 433 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 APBA2Q99767 749 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 CASS4Q9NQ75 786 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 EBF1Q9UH73 591 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 RUVBL2Q9Y230 463 aaKnown RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 FIS1Q9Y3D6 152 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 SQORQ9Y6N5 450 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 SLCO1B7G3V0H7 640 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 HTRA2O43464 458 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 DDHD2O94830 711 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 STAU1O95793 577 aaKnown RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 CKMT2P17540 419 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 CSRP3P50461 194 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 STRADAQ7RTN6 431 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 DEFB106AQ8N104 65 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 SNX31Q8N9S9 440 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 FAM47BQ8NA70 645 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 TSNARE1Q96NA8 513 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 NOL11Q9H8H0 719 aaKnown RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 TXNRD2Q9NNW7 524 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 ANLNQ9NQW6 1124 aa13.91□□□□□ -0.18
HDAC7-228ENST00000548938 RCOR3Q9P2K3 495 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 CNOT6Q9ULM6 557 aaKnown RBP13.91□□□□□ -0.18
HDAC7-228ENST00000548938 PRORSD1PA6NEY8 169 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 HSPA1AP0DMV8 641 aaKnown RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 HSPA1BP0DMV9 641 aaKnown RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 NMBRP28336 390 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 SNX16P57768 344 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 PRAMEP78395 509 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 CTBSQ01459 385 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 OTUD1Q5VV17 481 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 ITPRIPL1Q6GPH6 555 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 LRRC8EQ6NSJ5 796 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 DHRS4L2Q6PKH6 230 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 SLC41A1Q8IVJ1 513 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 EXOC8Q8IYI6 725 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 ZNF513Q8N8E2 541 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 FAM110BQ8TC76 370 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 FAM149B1Q96BN6 582 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 OMDQ99983 421 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 MLPHQ9BV36 600 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 TARM1B6A8C7 271 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 BOLA2-SMG1P6H3BVE0 249 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 PDGFRBP09619 1106 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 TGFB3P10600 412 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 GJA5P36382 358 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 MAGEA8P43361 318 aa13.9□□□□□ -0.18
HDAC7-228ENST00000548938 PLOD1Q02809 727 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-228ENST00000548938 BST2Q10589 180 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms