RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 HPCAP84074 193 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 GALNT2Q10471 571 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TRIM25Q14258 630 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PRPSAP1Q14558 356 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 MAPRE2Q15555 327 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 GLRA4Q5JXX5 417 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 FAM72AQ5TYM5 149 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 SYPL2Q5VXT5 272 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 FAM72DQ6L9T8 149 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 LINC00523Q86TU6 105 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 FAM72BQ86X60 149 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 CNTN4Q8IWV2 1026 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 KLHDC8BQ8IXV7 354 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 CENPLQ8N0S6 344 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PELI3Q8N2H9 469 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 GALNT4Q8N4A0 578 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 B3GALNT2Q8NCR0 500 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PPTC7Q8NI37 304 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 ADAM32Q8TC27 787 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 KCTD4Q8WVF5 259 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 EME1Q96AY2 570 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TMA16Q96EY4 203 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 DUS3LQ96G46 650 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 MAML3Q96JK9 1138 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TEKT5Q96M29 485 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 NPAS2Q99743 824 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 APBA2Q99767 749 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 MRPL1Q9BYD6 325 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TXNRD2Q9NNW7 524 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 COX16Q9P0S2 106 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 XPR1Q9UBH6 696 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 GJD2Q9UKL4 321 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 SARDHQ9UL12 918 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 GMEB1Q9Y692 573 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 CEPT1Q9Y6K0 416 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 LTBP3Q9NS15 1303 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 C9IYK1 514 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 SDHDO14521 159 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 SPTLC1O15269 473 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 AHSGP02765 367 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 ZNF23P17027 643 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 NPR3P17342 541 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 CDH2P19022 906 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 GLRBP48167 497 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 ZNF135P52742 658 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 GJA9P57773 515 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 DNAJB13P59910 316 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 RAB10P61026 200 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 PSME3P61289 254 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 USP46P62068 366 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 RHDQ02161 417 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 TRAP1Q12931 704 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 ZBTB17Q13105 803 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 STX5Q13190 355 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 Q3C1V9 767 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 ZNF618Q5T7W0 954 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 IL23RQ5VWK5 629 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 CHSY3Q70JA7 882 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 PIWIL4Q7Z3Z4 852 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 PIAS4Q8N2W9 510 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 NPWQ8N729 165 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 RIN3Q8TB24 985 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 EMID1Q96A84 441 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 GPR78Q96P69 363 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 C16orf70Q9BSU1 422 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 OSBPL11Q9BXB4 747 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 EIF2AQ9BY44 585 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 UNC93B1Q9H1C4 597 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 MROH8Q9H579 483 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 MRM3Q9HC36 420 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 WDR6Q9NNW5 1121 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 ACSS2Q9NR19 701 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 NCKIPSDQ9NZQ3 722 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 RBPJLQ9UBG7 517 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 AP4S1Q9Y587 144 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 PCDHGA7Q9Y5G6 932 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 CSADQ9Y600 493 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 AK5Q9Y6K8 562 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 MCM3APO60318 1980 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 PAPPA2Q9BXP8 1791 aa10.01□□□□□ -0.81
SMARCD1-205ENST00000548573 XPOTO43592 962 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 CACNG3O60359 315 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 RECQL4O94761 1208 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 PYGLP06737 847 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 YBX3P16989 372 aaKnown RBP eCLIP10□□□□□ -0.814e-12■■■□□ 16
SMARCD1-205ENST00000548573 TPH1P17752 444 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 WARSP23381 471 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 GABRB3P28472 473 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TAF6P49848 677 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 KPNA2P52292 529 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 IKBKEQ14164 716 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 SV2CQ496J9 727 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 MARCH8Q5T0T0 291 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TSTD2Q5T7W7 516 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 IRAK1BP1Q5VVH5 260 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 NOTUMQ6P988 496 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ARMCX2Q7L311 632 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 SIX6OS1Q8N1H7 587 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms