RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 I6L893 689 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 DDX3XO00571 662 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■■■□□ 16.2
CPSF7-224ENST00000544990 CCP110O43303 1012 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 SIN3BO75182 1162 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 PLEKP08567 350 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 MX2P20592 715 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 PSMA2P25787 234 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 CASP14P31944 242 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 HOXD12P35452 270 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 SOX18P35713 384 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ETFBP38117 255 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 TPMTP51580 245 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 IRAK1P51617 712 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 HDAC4P56524 1084 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 RPS14P62263 151 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 RPL7AP62424 266 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 MAMLD1Q13495 774 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 PUM1Q14671 1186 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 CCDC6Q16204 474 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 WDR45BQ5MNZ6 344 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 E4F1Q66K89 784 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 HGSNATQ68CP4 663 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 SPECC1LQ69YQ0 1117 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 PLEKHA7Q6IQ23 1121 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 RWDD4Q6NW29 188 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF783Q6ZMS7 281 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ARMCX6Q7L4S7 300 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 TMC6Q7Z403 805 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 RAB44Q7Z6P3 723 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 TFAP2DQ7Z6R9 452 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 SYT12Q8IV01 421 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 DRC7Q8IY82 874 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF683Q8IZ20 524 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 RNF214Q8ND24 703 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 CEP76Q8TAP6 659 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF653Q96CK0 615 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 TBC1D31Q96DN5 1066 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ALG14Q96F25 216 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 TOE1Q96GM8 510 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF419Q96HQ0 510 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 NUSAP1Q9BXS6 441 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 BTBD1Q9H0C5 482 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 RBSNQ9H1K0 784 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ISCUQ9H1K1 167 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 NPHS2Q9NP85 383 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ZNHIT6Q9NWK9 470 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 DONSONQ9NYP3 566 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 WSB2Q9NYS7 404 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 CNOT8Q9UFF9 292 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ADAMTS1Q9UHI8 967 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 SLCO3A1Q9UIG8 710 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 SNX10Q9Y5X0 201 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 PI4KAP42356 2102 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 SPTBN4Q9H254 2564 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 NYNRINQ9P2P1 1898 aaKnown RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 TMEM191CA6NGB0 347 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 MEI4A8MW99 385 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 EIF3CLB5ME19 914 aaKnown RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 IGLV3-19P01714 112 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 GYPCP04921 128 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 GNSP15586 552 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 ITPKAP23677 461 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 L1CAMP32004 1257 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SLC8A1P32418 973 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 PTGER3P43115 390 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 MAPKAPK2P49137 400 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 NUMBP49757 651 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 STK19P49842 368 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CTBSQ01459 385 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 GNA12Q03113 381 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SLC20A2Q08357 652 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SCAPQ12770 1279 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 ELAVL3Q14576 367 aaKnown RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 ACAP1Q15027 740 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SF3A2Q15428 464 aaKnown RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 DLG2Q15700 870 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CST6Q15828 149 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 DUOXA1Q1HG43 343 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 RSPO4Q2I0M5 234 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 RAB6CQ53S08 254 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 C9orf64Q5T6V5 341 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 FAM46CQ5VWP2 391 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 IL31Q6EBC2 164 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 RETSATQ6NUM9 610 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 USP30Q70CQ3 517 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 DSG4Q86SJ6 1040 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 FAM124AQ86V42 546 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CACUL1Q86Y37 369 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SH2D3CQ8N5H7 860 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 DEFB119Q8N690 84 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CCDC185Q8N715 623 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 DCAF4L2Q8NA75 395 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 ATP11CQ8NB49 1132 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CADM4Q8NFZ8 388 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 OR8K1Q8NGG5 319 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 OR52K2Q8NGK3 314 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 GANCQ8TET4 914 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms