RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MYBPC1Q00872 1141 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 GALNT2Q10471 571 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CDH17Q12864 832 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 SV2CQ496J9 727 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 SPATA31D4Q6ZUB0 917 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 PAQR9Q6ZVX9 377 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 OSTM1Q86WC4 334 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 FSTL5Q8N475 847 aaPredicted RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 HIC2Q96JB3 615 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 MPP4Q96JB8 637 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CNBD2Q96M20 576 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 ATXN10Q9UBB4 475 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 FBXW11Q9UKB1 542 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 TSC2P49815 1807 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 TCAF2A6NFQ2 919 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 I6L893 689 aaPredicted RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 STRNO43815 780 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 DLX3O60479 287 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 GPR32O75388 356 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 PENKP01210 267 aaPredicted RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 ASLP04424 464 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 MMP3P08254 477 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 DNAJB2P25686 324 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 GLRBP48167 497 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CREB5Q02930 508 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 PRPSAP1Q14558 356 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 USP41Q3LFD5 358 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 B3GNT6Q6ZMB0 384 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 METTL25Q8N6Q8 603 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 KCTD4Q8WVF5 259 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 TEKT5Q96M29 485 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CNOT11Q9UKZ1 510 aaKnown RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 COPG1Q9Y678 874 aaKnown RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 STX16-NPEPL1H3BU86 382 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 AHSGP02765 367 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 JUNP05412 331 aaKnown RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 PTPN1P18031 435 aaKnown RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 GABRB3P28472 473 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 POLD2P49005 469 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 TKTL1P51854 596 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CCNA1P78396 465 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CDC42EP1Q00587 391 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 NADK2Q4G0N4 442 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 NAPEPLDQ6IQ20 393 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 LRRC8EQ6NSJ5 796 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CLEC20AQ6ZU45 233 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 CENPLQ8N0S6 344 aaPredicted RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 RNF148Q8N7C7 305 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 KDM1BQ8NB78 822 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 DRAXINQ8NBI3 349 aaPredicted RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 B4GALNT2Q8NHY0 566 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 KLHL32Q96NJ5 620 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 OSMRQ99650 979 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 KLK14Q9P0G3 267 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 ACOT9Q9Y305 439 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 NRCAMQ92823 1304 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 PLXNB2O15031 1838 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 NRP1O14786 923 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 PSMD3O43242 534 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 XPOTO43592 962 aaKnown RBP12.46□□□□□ -0.41
NPC1-202ENST00000540608 FAM58BPP0C7Q3 252 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 KCNE1P15382 129 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 AVPR1AP37288 418 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 PGGT1BP53609 377 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 LILRA4P59901 499 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 PCBP1Q15365 356 aaKnown RBP eCLIP12.46□□□□□ -0.41
NPC1-202ENST00000540608 LRRC23Q53EV4 343 aaPredicted RBP12.46□□□□□ -0.41
NPC1-202ENST00000540608 XKR4Q5GH76 650 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 KLHDC10Q6PID8 442 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 LINC00523Q86TU6 105 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 SLC41A1Q8IVJ1 513 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 TOP6BLQ8N6T0 577 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 TMEM102Q8N9M5 508 aaPredicted RBP12.46□□□□□ -0.41
NPC1-202ENST00000540608 DDI1Q8WTU0 396 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 MAELQ96JY0 434 aaKnown RBP12.46□□□□□ -0.41
NPC1-202ENST00000540608 GPR78Q96P69 363 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 TSPAN18Q96SJ8 248 aa12.46□□□□□ -0.41
NPC1-202ENST00000540608 RBM38Q9H0Z9 239 aaKnown RBP12.46□□□□□ -0.41
NPC1-202ENST00000540608 UTP6Q9NYH9 597 aaKnown RBP12.46□□□□□ -0.41
NPC1-202ENST00000540608 C9IYK1 514 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 NPHS1O60500 1241 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 JCHAINP01591 159 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 HSPA1AP0DMV8 641 aaKnown RBP12.46□□□□□ -0.42
NPC1-202ENST00000540608 HSPA1BP0DMV9 641 aaKnown RBP12.46□□□□□ -0.42
NPC1-202ENST00000540608 GJA9P57773 515 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 CDKL1Q00532 357 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 GK3PQ14409 553 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 UGP2Q16851 508 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 C6orf52Q5T4I8 152 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 ZSCAN18Q8TBC5 510 aaPredicted RBP12.46□□□□□ -0.42
NPC1-202ENST00000540608 MARK4Q96L34 752 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 NPAS2Q99743 824 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 OCEL1Q9H607 264 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 GOLGA2P5Q9HBQ8 144 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 UBP1Q9NZI7 540 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 APPL1Q9UKG1 709 aa12.46□□□□□ -0.42
NPC1-202ENST00000540608 TMCO1Q9UM00 188 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms