RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 KCNMB2Q9Y691 235 aa7.81□□□□□ -1.16
CCDC60-204ENST00000539847 CACNA1AO00555 2505 aa7.81□□□□□ -1.16
CCDC60-204ENST00000539847 USP34Q70CQ2 3546 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 GOLGA8IPA6NC78 632 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 FAM159BA6NKW6 160 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 GOLGA8JA6NMD2 632 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 TTLL8A6PVC2 850 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 WDR64B1ANS9 1081 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 TISP43B9A030 160 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 TRIM49D1C9J1S8 452 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 MCF2LO15068 1137 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 GFRA3O60609 400 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ZNF189O75820 626 aaPredicted RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 IFNB1P01574 187 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 SMIM18P0DKX4 95 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 INSRRP14616 1297 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 LAG3P18627 525 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 PPM1AP35813 382 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ELK3P41970 407 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 HARS2P49590 506 aaKnown RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 HDAC4P56524 1084 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 YWHAEP62258 255 aaKnown RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 TUBA4AP68366 448 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 OTUD4Q01804 1114 aaKnown RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 TMED1Q13445 227 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 PWP1Q13610 501 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 CCNIQ14094 377 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 LLGL1Q15334 1064 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 CHI3L2Q15782 390 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 KBTBD12Q3ZCT8 623 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ANKRD22Q5VYY1 191 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 SLC39A4Q6P5W5 647 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 DCUN1D2Q6PH85 259 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 SLC24A5Q71RS6 500 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ADGRD2Q7Z7M1 963 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ARID3BQ8IVW6 561 aaPredicted RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 PQLC1Q8N2U9 271 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 SLC7A3Q8WY07 619 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 MPP4Q96JB8 637 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 LRGUKQ96M69 825 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 NECTIN4Q96NY8 510 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ACAP3Q96P50 834 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 TMEM121Q9BTD3 319 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 BRINP2Q9C0B6 783 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 S1PR5Q9H228 398 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 SUV39H2Q9H5I1 410 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 FAM124BQ9H5Z6 455 aaPredicted RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 MRPL40Q9NQ50 206 aaKnown RBP7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ARHGAP28Q9P2N2 729 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 SLC9A2Q9UBY0 812 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 STK39Q9UEW8 545 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 ARHGAP26Q9UNA1 814 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 POMPQ9Y244 141 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 DTNAQ9Y4J8 743 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 PCDHB7Q9Y5E2 793 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 COL1A2P08123 1366 aa7.8□□□□□ -1.16
CCDC60-204ENST00000539847 IGKV6D-21A0A0A0MT36 114 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 BCLAF3A2AJT9 711 aaKnown RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 DYTNA2CJ06 578 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ARHGAP42A6NI28 874 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 PRR5-ARHGAP8B1AHC4 643 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 C9IYK1 514 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 E9PBE3 544 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 F8VP50 259 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 CST8O60676 142 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 DNAJA2O60884 412 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 PFDN1O60925 122 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 H2AFYO75367 372 aaKnown RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 DGAT1O75907 488 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 FGF18O76093 207 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ALDH1A2O94788 518 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 TMEM63AO94886 807 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 APOEP02649 317 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 SERPINE1P05121 402 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 C8BP07358 591 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 THRAP10827 490 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 MLNP12872 115 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 NBL1P41271 181 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 GRIA2P42262 883 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 MAGEA3P43357 314 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ALDH1A3P47895 512 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 STAT5BP51692 787 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 PRKAA2P54646 552 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ADARP55265 1226 aaKnown RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 EIF3EP60228 445 aaKnown RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 FAM189BP81408 668 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ARHGAP8P85298 464 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 PDE1BQ01064 536 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 SP4Q02446 784 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 SLC25A11Q02978 314 aaKnown RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 KDSRQ06136 332 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ZNF252P-AS1Q0IIN9 211 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 APOFQ13790 326 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RFTN1Q14699 578 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 HERC3Q15034 1050 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 NOMO1Q15155 1222 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ATP13A4Q4VNC1 1196 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 XKR9Q5GH70 373 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RARS2Q5T160 578 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms