RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TSC1Q92574 1164 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 ISG20Q96AZ6 181 aaKnown RBP15.59■□□□□ 0.09
UBE3B-211ENST00000539843 DCBLD2Q96PD2 775 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 GBP4Q96PP9 640 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 OSBPL1AQ9BXW6 950 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 NRSN2Q9GZP1 204 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 MAGEH1Q9H213 219 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 USP29Q9HBJ7 922 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 FZD3Q9NPG1 666 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 NLRC4Q9NPP4 1024 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 TMPRSS4Q9NRS4 437 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 HECAQ9UBI9 543 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-211ENST00000539843 CA5BQ9Y2D0 317 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 FCF1Q9Y324 198 aaKnown RBP15.59■□□□□ 0.09
UBE3B-211ENST00000539843 HS3ST3A1Q9Y663 406 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 CACNA1GO43497 2377 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 AKAP13Q12802 2813 aa15.59■□□□□ 0.09
UBE3B-211ENST00000539843 ANKRD11Q6UB99 2663 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-211ENST00000539843 I6L893 689 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-211ENST00000539843 RIOK3O14730 519 aaKnown RBP15.58■□□□□ 0.08
UBE3B-211ENST00000539843 FPGTO14772 594 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 TSPAN6O43657 245 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 SIGLEC6O43699 453 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 AP1G1O43747 822 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 CYP1A1P04798 512 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-211ENST00000539843 GLDCP23378 1020 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 ADRA1BP35368 520 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 PTPN9P43378 593 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 RABIFP47224 123 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 TARDBPQ13148 414 aaKnown RBP eCLIP15.58■□□□□ 0.08
UBE3B-211ENST00000539843 KRT31Q15323 416 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 EFHC2Q5JST6 749 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 DPY19L2P1Q6NXN4 242 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 BNIPLQ7Z465 357 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 MARCH9Q86YJ5 346 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 PLPP6Q8IY26 295 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 CACTIN-AS1Q8N1I8 211 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 OR13H1Q8NG92 308 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 OR4C6Q8NH72 309 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 SLC20A1Q8WUM9 679 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 C1QTNF7Q9BXJ2 289 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 SLC17A9Q9BYT1 436 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 TM6SF2Q9BZW4 377 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 OSBPL2Q9H1P3 480 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 GANQ9H2C0 597 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 TMEM248Q9NWD8 314 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 DNAJC28Q9NX36 388 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 DONSONQ9NYP3 566 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 NCKIPSDQ9NZQ3 722 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 ADAM22Q9P0K1 906 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 DNAI1Q9UI46 699 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 NOCTQ9UK39 431 aaKnown RBP15.58■□□□□ 0.08
UBE3B-211ENST00000539843 WASF2Q9Y6W5 498 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 ASPMQ8IZT6 3477 aa15.58■□□□□ 0.08
UBE3B-211ENST00000539843 ACACAQ13085 2346 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 A0A087WV48 116 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 FFAR2O15552 330 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 ZMPSTE24O75844 475 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 PIAS2O75928 621 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 GSRP00390 522 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 CDK11BP21127 795 aaKnown RBP15.57■□□□□ 0.08
UBE3B-211ENST00000539843 DGKAP23743 735 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 ARF5P84085 180 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 FMO1Q01740 532 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 C15orf59Q2T9L4 293 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-211ENST00000539843 SEL1L3Q68CR1 1132 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 KYAT3Q6YP21 454 aaKnown RBP15.57■□□□□ 0.08
UBE3B-211ENST00000539843 Q6ZSR6 202 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 ABI3BPQ7Z7G0 1075 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 OR2AP1Q8NGE2 309 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 FAM172AQ8WUF8 416 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 CASKIN2Q8WXE0 1202 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 GDAP1L1Q96MZ0 367 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 ANO10Q9NW15 660 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 NLGN3Q9NZ94 848 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 FADS3Q9Y5Q0 445 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 CFAP47Q6ZTR5 3102 aa15.57■□□□□ 0.08
UBE3B-211ENST00000539843 PTPRBP23467 1997 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 C2CD4BA6NLJ0 364 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 KRIT1O00522 736 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 IGSF6O95976 241 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 PLEKP08567 350 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-211ENST00000539843 GPD1P21695 349 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 XPAP23025 273 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-211ENST00000539843 ACTN2P35609 894 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 CLDN2P57739 230 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 SEMG2Q02383 582 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 PROX2Q3B8N5 592 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 CCDC14Q49A88 953 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 TMEM259Q4ZIN3 620 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 ZNF805Q5CZA5 627 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 CDKAL1Q5VV42 579 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 TRNP1Q6NT89 227 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 PPP1R2P3Q6NXS1 205 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 DNAJC24Q6P3W2 148 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 GCNT7Q6ZNI0 430 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 PARS2Q7L3T8 475 aaKnown RBP15.56■□□□□ 0.08
UBE3B-211ENST00000539843 KANSL1Q7Z3B3 1105 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 SLFN11Q7Z7L1 901 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 PARGQ86W56 976 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms